Literature DB >> 19820097

Genome sequence of Aggregatibacter actinomycetemcomitans serotype c strain D11S-1.

Casey Chen1, Weerayuth Kittichotirat, Yan Si, Roger Bumgarner.   

Abstract

Aggregatibacter actinomycetemcomitans is a major etiological agent of periodontitis. Here we report the complete genome sequence of serotype c strain D11S-1, which was recovered from the subgingival plaque of a patient diagnosed with generalized aggressive periodontitis.

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Year:  2009        PMID： 19820097      PMCID： PMC2786557          DOI： 10.1128/JB.01203-09

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  12 in total

1.  Population structure and genetic diversity of Actinobacillus actinomycetemcomitans strains isolated from localized juvenile periodontitis patients.

Authors:  Jeffrey B Kaplan; Helen C Schreiner; David Furgang; Daniel H Fine
Journal:  J Clin Microbiol       Date:  2002-04       Impact factor: 5.948

2.  Mauve: multiple alignment of conserved genomic sequence with rearrangements.

Authors:  Aaron C E Darling; Bob Mau; Frederick R Blattner; Nicole T Perna
Journal:  Genome Res       Date:  2004-07       Impact factor: 9.043

3.  Complete genomic nucleotide sequence of the temperate bacteriophage Aa Phi 23 of Actinobacillus actinomycetemcomitans.

Authors:  Grégory Resch; Eva M Kulik; Fred S Dietrich; Jürg Meyer
Journal:  J Bacteriol       Date:  2004-08       Impact factor: 3.490

4.  Genome sequencing in microfabricated high-density picolitre reactors.

Authors:  Marcel Margulies; Michael Egholm; William E Altman; Said Attiya; Joel S Bader; Lisa A Bemben; Jan Berka; Michael S Braverman; Yi-Ju Chen; Zhoutao Chen; Scott B Dewell; Lei Du; Joseph M Fierro; Xavier V Gomes; Brian C Godwin; Wen He; Scott Helgesen; Chun Heen Ho; Chun He Ho; Gerard P Irzyk; Szilveszter C Jando; Maria L I Alenquer; Thomas P Jarvie; Kshama B Jirage; Jong-Bum Kim; James R Knight; Janna R Lanza; John H Leamon; Steven M Lefkowitz; Ming Lei; Jing Li; Kenton L Lohman; Hong Lu; Vinod B Makhijani; Keith E McDade; Michael P McKenna; Eugene W Myers; Elizabeth Nickerson; John R Nobile; Ramona Plant; Bernard P Puc; Michael T Ronan; George T Roth; Gary J Sarkis; Jan Fredrik Simons; John W Simpson; Maithreyan Srinivasan; Karrie R Tartaro; Alexander Tomasz; Kari A Vogt; Greg A Volkmer; Shally H Wang; Yong Wang; Michael P Weiner; Pengguang Yu; Richard F Begley; Jonathan M Rothberg
Journal:  Nature       Date:  2005-07-31       Impact factor: 49.962

5.  Identifying bacterial genes and endosymbiont DNA with Glimmer.

Authors:  Arthur L Delcher; Kirsten A Bratke; Edwin C Powers; Steven L Salzberg
Journal:  Bioinformatics       Date:  2007-01-19       Impact factor: 6.937

Review 6.  The etiology of periodontal disease revisited by population genetic analysis.

Authors:  Mogens Kilian; Ellen V G Frandsen; Dorte Haubek; Knud Poulsen
Journal:  Periodontol 2000       Date:  2006       Impact factor: 7.589

7.  Analyzing patterns of microbial evolution using the mauve genome alignment system.

Authors:  Aaron E Darling; Todd J Treangen; Xavier Messeguer; Nicole T Perna
Journal:  Methods Mol Biol       Date:  2007

8.  Aggressive periodontitis in a 16-year-old Ghanaian adolescent, the original source of Actinobacillus actinomycetemcomitans strain HK1651 - a 10-year follow up.

Authors:  D Haubek; A Havemose-Poulsen; J Westergaard
Journal:  Int J Paediatr Dent       Date:  2006-09       Impact factor: 3.455

9.  Actinobacillus actinomycetemcomitans genotypes in relation to serotypes and periodontal status.

Authors:  S Asikainen; C Chen; J Slots
Journal:  Oral Microbiol Immunol       Date:  1995-04

10.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971
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  21 in total

1.  Genome sequence of a serotype b non-JP2 aggregatibacter actinomycetemcomitans strain, ANH9381, from a periodontally healthy individual.

Authors:  Casey Chen; Weerayuth Kittichotirat; Weizhen Chen; Jennifer S Downey; Roger Bumgarner
Journal:  J Bacteriol       Date:  2012-04       Impact factor: 3.490

2.  Genome sequence of naturally competent Aggregatibacter actinomycetemcomitans serotype a strain D7S-1.

Authors:  Casey Chen; Weerayuth Kittichotirat; Weizhen Chen; Jennifer S Downey; Yan Si; Roger Bumgarner
Journal:  J Bacteriol       Date:  2010-03-26       Impact factor: 3.490

3.  Identifying bacterial menu choices from the host buffet during infections.

Authors:  Robert J C McLean; Shelly L Pringle
Journal:  J Bacteriol       Date:  2013-09-13       Impact factor: 3.490

4.  The cyclic-AMP receptor protein (CRP) regulon in Aggregatibacter actinomycetemcomitans includes leukotoxin.

Authors:  Leigh A Feuerbacher; Alex Burgum; David Kolodrubetz
Journal:  Microb Pathog       Date:  2011-05-07       Impact factor: 3.738

5.  Markedly different genome arrangements between serotype a strains and serotypes b or c strains of Aggregatibacter actinomycetemcomitans.

Authors:  Weerayuth Kittichotirat; Roger Bumgarner; Casey Chen
Journal:  BMC Genomics       Date:  2010-09-08       Impact factor: 3.969

6.  Haemophilus parainfluenzae has a limited core lipopolysaccharide repertoire with no phase variation.

Authors:  Rosanna E B Young; Derek W Hood
Journal:  Glycoconj J       Date:  2012-10-24       Impact factor: 2.916

7.  Occurrence and serotype distribution of Aggregatibacter actinomycetemcomitans in subjects without periodontitis in Turkey.

Authors:  Başak Doğan; Jason Chen; Sinem Yıldız Çiftlikli; Jonathan Huang; Tanju Kadir; Anıl Kınacı Alnıak; Casey Chen
Journal:  Arch Oral Biol       Date:  2015-10-30       Impact factor: 2.633

8.  Comparative genomic hybridization and transcriptome analysis with a pan-genome microarray reveal distinctions between JP2 and non-JP2 genotypes of Aggregatibacter actinomycetemcomitans.

Authors:  Y Huang; W Kittichotirat; M P A Mayer; R Hall; R Bumgarner; C Chen
Journal:  Mol Oral Microbiol       Date:  2012-10-12       Impact factor: 3.563

9.  Proteomics of protein secretion by Aggregatibacter actinomycetemcomitans.

Authors:  Vincent Zijnge; Thomas Kieselbach; Jan Oscarsson
Journal:  PLoS One       Date:  2012-07-25       Impact factor: 3.240

10.  An evolutionary link between natural transformation and CRISPR adaptive immunity.

Authors:  Peter Jorth; Marvin Whiteley
Journal:  MBio       Date:  2012-11-01       Impact factor: 7.867
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