Literature DB >> 19818673

The flowering world: a tale of duplications.

Yves Van de Peer1, Jeffrey A Fawcett, Sebastian Proost, Lieven Sterck, Klaas Vandepoele.   

Abstract

Flowering plants contain many genes, most of which were created during the past 200 or so million years through small- and large-scale duplications. Paleo-polyploidy events, in particular, have been the subject of much recent research. There is a growing consensus that one or more genome doubling or merging events occurred early during the evolution of the flowering plants, and that many lineages have since undergone additional, independent and more recent duplication events. Here, we review the difficulties in determining the number of genome duplications and discuss how the completion of some additional genome sequences of species occupying key phylogenetic positions has led to a better understanding of the timing of certain duplication events. This is important if we want to demonstrate the significance of genome duplications for the evolution and radiation of (different groups of) flowering plants.

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Year:  2009        PMID: 19818673     DOI: 10.1016/j.tplants.2009.09.001

Source DB:  PubMed          Journal:  Trends Plant Sci        ISSN: 1360-1385            Impact factor:   18.313


  128 in total

1.  Homoeologous shuffling and chromosome compensation maintain genome balance in resynthesized allopolyploid Brassica napus.

Authors:  Zhiyong Xiong; Robert T Gaeta; J Chris Pires
Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-21       Impact factor: 11.205

Review 2.  Morphological evolution in land plants: new designs with old genes.

Authors:  Nuno D Pires; Liam Dolan
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2012-02-19       Impact factor: 6.237

3.  Dissecting plant genomes with the PLAZA comparative genomics platform.

Authors:  Michiel Van Bel; Sebastian Proost; Elisabeth Wischnitzki; Sara Movahedi; Christopher Scheerlinck; Yves Van de Peer; Klaas Vandepoele
Journal:  Plant Physiol       Date:  2011-12-23       Impact factor: 8.340

4.  Cytochromes p450.

Authors:  Søren Bak; Fred Beisson; Gerard Bishop; Björn Hamberger; René Höfer; Suzanne Paquette; Danièle Werck-Reichhart
Journal:  Arabidopsis Book       Date:  2011-10-06

5.  Evolution of double positive autoregulatory feedback loops in CYCLOIDEA2 clade genes is associated with the origin of floral zygomorphy.

Authors:  Xia Yang; Hong-Bo Pang; Bo-Ling Liu; Zhi-Jing Qiu; Qiu Gao; Lai Wei; Yang Dong; Yin-Zheng Wang
Journal:  Plant Cell       Date:  2012-05-30       Impact factor: 11.277

6.  Altered patterns of fractionation and exon deletions in Brassica rapa support a two-step model of paleohexaploidy.

Authors:  Haibao Tang; Margaret R Woodhouse; Feng Cheng; James C Schnable; Brent S Pedersen; Gavin Conant; Xiaowu Wang; Michael Freeling; J Chris Pires
Journal:  Genetics       Date:  2012-02-02       Impact factor: 4.562

7.  Gene Duplicability of Core Genes Is Highly Consistent across All Angiosperms.

Authors:  Zhen Li; Jonas Defoort; Setareh Tasdighian; Steven Maere; Yves Van de Peer; Riet De Smet
Journal:  Plant Cell       Date:  2016-01-07       Impact factor: 11.277

8.  Grass microRNA gene paleohistory unveils new insights into gene dosage balance in subgenome partitioning after whole-genome duplication.

Authors:  Michael Abrouk; Rongzhi Zhang; Florent Murat; Aili Li; Caroline Pont; Long Mao; Jérôme Salse
Journal:  Plant Cell       Date:  2012-05-15       Impact factor: 11.277

9.  PLAZA: a comparative genomics resource to study gene and genome evolution in plants.

Authors:  Sebastian Proost; Michiel Van Bel; Lieven Sterck; Kenny Billiau; Thomas Van Parys; Yves Van de Peer; Klaas Vandepoele
Journal:  Plant Cell       Date:  2009-12-29       Impact factor: 11.277

10.  Ancestral polyploidy in seed plants and angiosperms.

Authors:  Yuannian Jiao; Norman J Wickett; Saravanaraj Ayyampalayam; André S Chanderbali; Lena Landherr; Paula E Ralph; Lynn P Tomsho; Yi Hu; Haiying Liang; Pamela S Soltis; Douglas E Soltis; Sandra W Clifton; Scott E Schlarbaum; Stephan C Schuster; Hong Ma; Jim Leebens-Mack; Claude W dePamphilis
Journal:  Nature       Date:  2011-04-10       Impact factor: 49.962

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