Literature DB >> 19818109

A grass molecular identification system for forensic botany: a critical evaluation of the strengths and limitations.

Jodie Ward1, Simon R Gilmore, James Robertson, Rod Peakall.   

Abstract

Plant material is frequently encountered in criminal investigations but often overlooked as potential evidence. We designed a DNA-based molecular identification system for 100 Australian grasses that consisted of a series of polymerase chain reaction assays that enabled the progressive identification of grasses to different taxonomic levels. The identification system was based on DNA sequence variation at four chloroplast and two mitochondrial loci. Seventeen informative indels and 68 single-nucleotide polymorphisms were utilized as molecular markers for subfamily to species-level identification. To identify an unknown sample to subfamily level required a minimum of four markers or nine markers for species identification. The accuracy of the system was confirmed by blind tests. We have demonstrated "proof of concept" of a molecular identification system for trace botanical samples. Our evaluation suggests that the adoption of a system that combines this approach with DNA sequencing could assist the morphological identification of grasses found as forensic evidence.

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Year:  2009        PMID: 19818109     DOI: 10.1111/j.1556-4029.2009.01196.x

Source DB:  PubMed          Journal:  J Forensic Sci        ISSN: 0022-1198            Impact factor:   1.832


  5 in total

Review 1.  Microbiomes in forensic botany: a review.

Authors:  Sarah Ishak; Eleanor Dormontt; Jennifer M Young
Journal:  Forensic Sci Med Pathol       Date:  2021-04-08       Impact factor: 2.007

2.  DNA barcoding of the Lemnaceae, a family of aquatic monocots.

Authors:  Wenqin Wang; Yongrui Wu; Yiheng Yan; Marina Ermakova; Randall Kerstetter; Joachim Messing
Journal:  BMC Plant Biol       Date:  2010-09-16       Impact factor: 4.215

3.  Bamboo tea: reduction of taxonomic complexity and application of DNA diagnostics based on rbcL and matK sequence data.

Authors:  Thomas Horn; Annette Häser
Journal:  PeerJ       Date:  2016-12-08       Impact factor: 2.984

4.  Testing efficacy of distance and tree-based methods for DNA barcoding of grasses (Poaceae tribe Poeae) in Australia.

Authors:  Joanne L Birch; Neville G Walsh; David J Cantrill; Gareth D Holmes; Daniel J Murphy
Journal:  PLoS One       Date:  2017-10-30       Impact factor: 3.240

Review 5.  Forensic genetics and genomics: Much more than just a human affair.

Authors:  Miguel Arenas; Filipe Pereira; Manuela Oliveira; Nadia Pinto; Alexandra M Lopes; Veronica Gomes; Angel Carracedo; Antonio Amorim
Journal:  PLoS Genet       Date:  2017-09-21       Impact factor: 5.917

  5 in total

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