Literature DB >> 19817739

Utilizing Gaussian Markov random field properties of Bayesian animal models.

Ingelin Steinsland1, Henrik Jensen.   

Abstract

In this article, we demonstrate how Gaussian Markov random field properties give large computational benefits and new opportunities for the Bayesian animal model. We make inference by computing the posteriors for important quantitative genetic variables. For the single-trait animal model, a nonsampling-based approximation is presented. For the multitrait model, we set up a robust and fast Markov chain Monte Carlo algorithm. The proposed methodology was used to analyze quantitative genetic properties of morphological traits of a wild house sparrow population. Results for single- and multitrait models were compared.
© 2009, The International Biometric Society.

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Year:  2010        PMID: 19817739     DOI: 10.1111/j.1541-0420.2009.01336.x

Source DB:  PubMed          Journal:  Biometrics        ISSN: 0006-341X            Impact factor:   2.571


  7 in total

1.  Bayesian inference of genetic parameters based on conditional decompositions of multivariate normal distributions.

Authors:  Jon Hallander; Patrik Waldmann; Chunkao Wang; Mikko J Sillanpää
Journal:  Genetics       Date:  2010-03-29       Impact factor: 4.562

2.  Correlates of egg size variation in a population of house sparrow Passer domesticus.

Authors:  Thomas Kvalnes; Thor Harald Ringsby; Henrik Jensen; Bernt-Erik Sæther
Journal:  Oecologia       Date:  2012-09-06       Impact factor: 3.225

3.  Flexible modelling of spatial variation in agricultural field trials with the R package INLA.

Authors:  Maria Lie Selle; Ingelin Steinsland; John M Hickey; Gregor Gorjanc
Journal:  Theor Appl Genet       Date:  2019-09-18       Impact factor: 5.699

4.  Animal models and integrated nested Laplace approximations.

Authors:  Anna Marie Holand; Ingelin Steinsland; Sara Martino; Henrik Jensen
Journal:  G3 (Bethesda)       Date:  2013-08-07       Impact factor: 3.154

5.  On estimation and identifiability issues of sex-linked inheritance with a case study of pigmentation in Swiss barn owl (Tyto alba).

Authors:  Camilla T Larsen; Anna M Holand; Henrik Jensen; Ingelin Steinsland; Alexandre Roulin
Journal:  Ecol Evol       Date:  2014-03-29       Impact factor: 2.912

6.  Is my study system good enough? A case study for identifying maternal effects.

Authors:  Anna Marie Holand; Ingelin Steinsland
Journal:  Ecol Evol       Date:  2016-04-20       Impact factor: 2.912

7.  Reparametrization-based estimation of genetic parameters in multi-trait animal model using Integrated Nested Laplace Approximation.

Authors:  Boby Mathew; Anna Marie Holand; Petri Koistinen; Jens Léon; Mikko J Sillanpää
Journal:  Theor Appl Genet       Date:  2015-11-18       Impact factor: 5.699

  7 in total

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