Literature DB >> 19812621

Gal4 turnover and transcription activation.

Galen A Collins1, J Russell Lipford, Raymond J Deshaies, William P Tansey.   

Abstract

Growing evidence supports the notion that proteasome-mediated destruction of transcriptional activators can be intimately coupled to their function. Recently, Nalley et al. challenged this view by reporting that the prototypical yeast activator Gal4 does not dynamically associate with chromatin, but rather 'locks in' to stable promoter complexes that are resistant to competition. Here we present evidence that the assay used to reach this conclusion is unsuitable, and that promoter-bound, active Gal4 is indeed susceptible to competition in vivo. Our data challenge the key evidence that Nalley et al. used to reach their conclusion, and indicate that Gal4 functions in vivo within the context of dynamic promoter complexes.

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Year:  2009        PMID: 19812621      PMCID: PMC3072683          DOI: 10.1038/nature08406

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  8 in total

Review 1.  How the ubiquitin-proteasome system controls transcription.

Authors:  Masafumi Muratani; William P Tansey
Journal:  Nat Rev Mol Cell Biol       Date:  2003-03       Impact factor: 94.444

2.  Diverse roles for ubiquitin-dependent proteolysis in transcriptional activation.

Authors:  J Russell Lipford; Raymond J Deshaies
Journal:  Nat Cell Biol       Date:  2003-10       Impact factor: 28.824

3.  Chromatin immunoprecipitation to study protein-DNA interactions in budding yeast.

Authors:  Elena Ezhkova; William P Tansey
Journal:  Methods Mol Biol       Date:  2006

4.  A putative stimulatory role for activator turnover in gene expression.

Authors:  J Russell Lipford; Geoffrey T Smith; Yong Chi; Raymond J Deshaies
Journal:  Nature       Date:  2005-11-03       Impact factor: 49.962

5.  Proteolytic turnover of the Gal4 transcription factor is not required for function in vivo.

Authors:  Kip Nalley; Stephen Albert Johnston; Thomas Kodadek
Journal:  Nature       Date:  2006-08-23       Impact factor: 49.962

6.  The F box protein Dsg1/Mdm30 is a transcriptional coactivator that stimulates Gal4 turnover and cotranscriptional mRNA processing.

Authors:  Masafumi Muratani; Charles Kung; Kevan M Shokat; William P Tansey
Journal:  Cell       Date:  2005-03-25       Impact factor: 41.582

7.  Cooperative DNA binding of the yeast transcriptional activator GAL4.

Authors:  E Giniger; M Ptashne
Journal:  Proc Natl Acad Sci U S A       Date:  1988-01       Impact factor: 11.205

8.  Functional overlap of sequences that activate transcription and signal ubiquitin-mediated proteolysis.

Authors:  S E Salghetti; M Muratani; H Wijnen; B Futcher; W P Tansey
Journal:  Proc Natl Acad Sci U S A       Date:  2000-03-28       Impact factor: 11.205

  8 in total
  14 in total

1.  Sumoylation of transcription factor Gcn4 facilitates its Srb10-mediated clearance from promoters in yeast.

Authors:  Emanuel Rosonina; Sarah M Duncan; James L Manley
Journal:  Genes Dev       Date:  2012-02-15       Impact factor: 11.361

2.  Genome-wide measurement of protein-DNA binding dynamics using competition ChIP.

Authors:  Colin R Lickwar; Florian Mueller; Jason D Lieb
Journal:  Nat Protoc       Date:  2013-06-13       Impact factor: 13.491

Review 3.  No Splicing, no dicing: non-proteolytic roles of the ubiquitin-proteasome system in transcription.

Authors:  Thomas Kodadek
Journal:  J Biol Chem       Date:  2009-12-02       Impact factor: 5.157

4.  Live-cell imaging reveals the interplay between transcription factors, nucleosomes, and bursting.

Authors:  Benjamin T Donovan; Anh Huynh; David A Ball; Heta P Patel; Michael G Poirier; Daniel R Larson; Matthew L Ferguson; Tineke L Lenstra
Journal:  EMBO J       Date:  2019-05-17       Impact factor: 11.598

5.  Combined chemical and genetic approach to inhibit proteolysis by the proteasome.

Authors:  Galen A Collins; Tara Adele Gomez; Raymond J Deshaies; William P Tansey
Journal:  Yeast       Date:  2010-11       Impact factor: 3.239

6.  How the ubiquitin proteasome system regulates the regulators of transcription.

Authors:  Gary Ee; Norbert Lehming
Journal:  Transcription       Date:  2012-09-01

Review 7.  Regulation of gene expression by the ubiquitin-proteasome system.

Authors:  Tingting Yao; Ada Ndoja
Journal:  Semin Cell Dev Biol       Date:  2012-03-09       Impact factor: 7.727

Review 8.  The ubiquitin-proteasome system of Saccharomyces cerevisiae.

Authors:  Daniel Finley; Helle D Ulrich; Thomas Sommer; Peter Kaiser
Journal:  Genetics       Date:  2012-10       Impact factor: 4.562

9.  Measuring chromatin interaction dynamics on the second time scale at single-copy genes.

Authors:  Kunal Poorey; Ramya Viswanathan; Melissa N Carver; Tatiana S Karpova; Shana M Cirimotich; James G McNally; Stefan Bekiranov; David T Auble
Journal:  Science       Date:  2013-10-03       Impact factor: 47.728

10.  Physical and genetic associations of the Irc20 ubiquitin ligase with Cdc48 and SUMO.

Authors:  Aaron Richardson; Richard G Gardner; Gregory Prelich
Journal:  PLoS One       Date:  2013-10-14       Impact factor: 3.240

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