Literature DB >> 19812170

Detection of novel sequences related to african Swine Fever virus in human serum and sewage.

Joy Loh1, Guoyan Zhao, Rachel M Presti, Lori R Holtz, Stacy R Finkbeiner, Lindsay Droit, Zoilmar Villasana, Collin Todd, James M Pipas, Byron Calgua, Rosina Girones, David Wang, Herbert W Virgin.   

Abstract

The family Asfarviridae contains only a single virus species, African swine fever virus (ASFV). ASFV is a viral agent with significant economic impact due to its devastating effects on populations of domesticated pigs during outbreaks but has not been reported to infect humans. We report here the discovery of novel viral sequences in human serum and sewage which are clearly related to the asfarvirus family but highly divergent from ASFV. Detection of these sequences suggests that greater genetic diversity may exist among asfarviruses than previously thought and raises the possibility that human infection by asfarviruses may occur.

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Year:  2009        PMID： 19812170      PMCID： PMC2786824          DOI： 10.1128/JVI.00638-09

Source DB:  PubMed          Journal:  J Virol        ISSN： 0022-538X            Impact factor:   5.103


  29 in total

1.  The 1.2-megabase genome sequence of Mimivirus.

Authors:  Didier Raoult; Stéphane Audic; Catherine Robert; Chantal Abergel; Patricia Renesto; Hiroyuki Ogata; Bernard La Scola; Marie Suzan; Jean-Michel Claverie
Journal:  Science       Date:  2004-10-14       Impact factor: 47.728

Review 2.  Evolutionary genomics of nucleo-cytoplasmic large DNA viruses.

Authors:  Lakshminarayan M Iyer; S Balaji; Eugene V Koonin; L Aravind
Journal:  Virus Res       Date:  2006-02-21       Impact factor: 3.303

Review 3.  Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

Authors:  S F Altschul; T L Madden; A A Schäffer; J Zhang; Z Zhang; W Miller; D J Lipman
Journal:  Nucleic Acids Res       Date:  1997-09-01       Impact factor: 16.971

4.  The DNA polymerase-encoding gene of African swine fever virus: sequence and transcriptional analysis.

Authors:  J M Rodríguez; R J Yáñez; J F Rodríguez; E Viñuela; M L Salas
Journal:  Gene       Date:  1993-12-22       Impact factor: 3.688

5.  The identification of an African swine fever gene with conserved helicase motifs and a striking homology to herpes virus origin binding protein, UL9.

Authors:  M D Sussman; Z Lu; G F Kutish; C A Afonso; D L Rock
Journal:  Nucleic Acids Res       Date:  1993-05-11       Impact factor: 16.971

6.  Molecular epidemiology of African swine fever in East Africa.

Authors:  B A Lubisi; A D S Bastos; R M Dwarka; W Vosloo
Journal:  Arch Virol       Date:  2005-08-01       Impact factor: 2.574

7.  Genetic identification and nucleotide sequence of the DNA polymerase gene of African swine fever virus.

Authors:  A Martins; G Ribeiro; M I Marques; J V Costa
Journal:  Nucleic Acids Res       Date:  1994-01-25       Impact factor: 16.971

8.  Two putative African swine fever virus helicases similar to yeast 'DEAH' pre-mRNA processing proteins and vaccinia virus ATPases D11L and D6R.

Authors:  R J Yáñez; J M Rodríguez; M Boursnell; J F Rodríguez; E Viñuela
Journal:  Gene       Date:  1993-12-08       Impact factor: 3.688

9.  African swine fever virus encodes two genes which share significant homology with the two largest subunits of DNA-dependent RNA polymerases.

Authors:  R J Yáñez; M Boursnell; M L Nogal; L Yuste; E Viñuela
Journal:  Nucleic Acids Res       Date:  1993-05-25       Impact factor: 16.971

10.  Origin and evolution of the archaeo-eukaryotic primase superfamily and related palm-domain proteins: structural insights and new members.

Authors:  Lakshminarayan M Iyer; Eugene V Koonin; Detlef D Leipe; L Aravind
Journal:  Nucleic Acids Res       Date:  2005-07-15       Impact factor: 16.971
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  17 in total

1.  Next-generation sequencing of prostate tumors provides independent evidence of xenotropic murine leukemia virus-related gammaretrovirus contamination.

Authors:  Fan Mo; Alexander W Wyatt; Chunxiao Wu; Anna V Lapuk; Marco A Marra; Martin E Gleave; Stanislav V Volik; Colin C Collins
Journal:  J Clin Microbiol       Date:  2011-12-07       Impact factor: 5.948

2.  Faustovirus, an asfarvirus-related new lineage of giant viruses infecting amoebae.

Authors:  Dorine Gaëlle Reteno; Samia Benamar; Jacques Bou Khalil; Julien Andreani; Nicholas Armstrong; Thomas Klose; Michael Rossmann; Philippe Colson; Didier Raoult; Bernard La Scola
Journal:  J Virol       Date:  2015-07       Impact factor: 5.103

3.  A decade's perspective on DNA sequencing technology.

Authors:  Elaine R Mardis
Journal:  Nature       Date:  2011-02-10       Impact factor: 49.962

4.  Evaluation of high-throughput sequencing for identifying known and unknown viruses in biological samples.

Authors:  Justine Cheval; Virginie Sauvage; Lionel Frangeul; Laurent Dacheux; Ghislaine Guigon; Nicolas Dumey; Kevin Pariente; Claudine Rousseaux; Fabien Dorange; Nicolas Berthet; Sylvain Brisse; Ivan Moszer; Hervé Bourhy; Claude Jean Manuguerra; Marc Lecuit; Ana Burguiere; Valérie Caro; Marc Eloit
Journal:  J Clin Microbiol       Date:  2011-06-29       Impact factor: 5.948

5.  Pathogenic simian immunodeficiency virus infection is associated with expansion of the enteric virome.

Authors:  Scott A Handley; Larissa B Thackray; Guoyan Zhao; Rachel Presti; Andrew D Miller; Lindsay Droit; Peter Abbink; Lori F Maxfield; Amal Kambal; Erning Duan; Kelly Stanley; Joshua Kramer; Sheila C Macri; Sallie R Permar; Joern E Schmitz; Keith Mansfield; Jason M Brenchley; Ronald S Veazey; Thaddeus S Stappenbeck; David Wang; Dan H Barouch; Herbert W Virgin
Journal:  Cell       Date:  2012-10-12       Impact factor: 41.582

6.  Sequence variability in clinical and laboratory isolates of herpes simplex virus 1 reveals new mutations.

Authors:  Moriah L Szpara; Lance Parsons; L W Enquist
Journal:  J Virol       Date:  2010-03-10       Impact factor: 5.103

7.  Detection of African swine fever virus-like sequences in ponds in the Mississippi Delta through metagenomic sequencing.

Authors:  Xiu-Feng Wan; J Lamar Barnett; Fred Cunningham; Si Chen; Guohua Yang; Shannon Nash; Li-Ping Long; Lorelei Ford; Sherry Blackmon; Yan Zhang; Larry Hanson; Qiang He
Journal:  Virus Genes       Date:  2013-01-22       Impact factor: 2.332

8.  Detection and identification of putative bacterial endosymbionts and endogenous viruses in tick cell lines.

Authors:  M Pilar Alberdi; Matthew J Dalby; Julio Rodriguez-Andres; John K Fazakerley; Alain Kohl; Lesley Bell-Sakyi
Journal:  Ticks Tick Borne Dis       Date:  2012-06-27       Impact factor: 3.744

9.  Sequence analysis of the human virome in febrile and afebrile children.

Authors:  Kristine M Wylie; Kathie A Mihindukulasuriya; Erica Sodergren; George M Weinstock; Gregory A Storch
Journal:  PLoS One       Date:  2012-06-13       Impact factor: 3.240

10.  A wide extent of inter-strain diversity in virulent and vaccine strains of alphaherpesviruses.

Authors:  Moriah L Szpara; Yolanda R Tafuri; Lance Parsons; S Rafi Shamim; Kevin J Verstrepen; Matthieu Legendre; L W Enquist
Journal:  PLoS Pathog       Date:  2011-10-13       Impact factor: 6.823
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