Literature DB >> 19805290

Real-time imaging of histone H4 hyperacetylation in living cells.

Kazuki Sasaki1, Tamaki Ito, Norikazu Nishino, Saadi Khochbin, Minoru Yoshida.   

Abstract

To visualize histone acetylation in living cells, we developed a genetically encoded fluorescent resonance energy transfer (FRET)-based indicator. Response of the indicator reflects changes in the acetylation state of both K5 and K8 in histone H4. Using this acetylation indicator, we were able to monitor the dynamic fluctuation of histone H4 acetylation levels during mitosis, as well as acetylation changes in response to structurally distinct histone deacetylase inhibitors.

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Year:  2009        PMID： 19805290      PMCID： PMC2752582          DOI： 10.1073/pnas.0902150106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN： 0027-8424            Impact factor:   11.205


  26 in total

1.  Asymmetries in the nucleosome core particle at 2.5 A resolution.

Authors:  J M Harp; B L Hanson; D E Timm; G J Bunick
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2000-12

2.  Regulation of global acetylation in mitosis through loss of histone acetyltransferases and deacetylases from chromatin.

Authors:  M J Kruhlak; M J Hendzel; W Fischle; N R Bertos; S Hameed; X J Yang; E Verdin; D P Bazett-Jones
Journal:  J Biol Chem       Date:  2001-07-30       Impact factor: 5.157

Review 3.  Bromodomain: an acetyl-lysine binding domain.

Authors:  Lei Zeng; Ming Ming Zhou
Journal:  FEBS Lett       Date:  2002-02-20       Impact factor: 4.124

Review 4.  Visualization of the spatial and temporal dynamics of intracellular signaling.

Authors:  Atsushi Miyawaki
Journal:  Dev Cell       Date:  2003-03       Impact factor: 12.270

5.  Selective recognition of acetylated histones by bromodomain proteins visualized in living cells.

Authors:  Tomohiko Kanno; Yuka Kanno; Richard M Siegel; Moon Kyoo Jang; Michael J Lenardo; Keiko Ozato
Journal:  Mol Cell       Date:  2004-01-16       Impact factor: 17.970

6.  FK228 (depsipeptide) as a natural prodrug that inhibits class I histone deacetylases.

Authors:  Ryohei Furumai; Akihisa Matsuyama; Nobuyuki Kobashi; Kun-Hyung Lee; Makoto Nishiyama; Hidenori Nakajima; Akito Tanaka; Yasuhiko Komatsu; Norikazu Nishino; Minoru Yoshida; Sueharu Horinouchi
Journal:  Cancer Res       Date:  2002-09-01       Impact factor: 12.701

7.  Cyclic hydroxamic-acid-containing peptide 31, a potent synthetic histone deacetylase inhibitor with antitumor activity.

Authors:  Y Komatsu; K Y Tomizaki; M Tsukamoto; T Kato; N Nishino; S Sato; T Yamori; T Tsuruo; R Furumai; M Yoshida; S Horinouchi; H Hayashi
Journal:  Cancer Res       Date:  2001-06-01       Impact factor: 12.701

8.  Histone acetylation and deacetylation: identification of acetylation and methylation sites of HeLa histone H4 by mass spectrometry.

Authors:  Kangling Zhang; Katherine E Williams; Lan Huang; Peter Yau; Joseph S Siino; E Morton Bradbury; Patrick R Jones; Michael J Minch; Alma L Burlingame
Journal:  Mol Cell Proteomics       Date:  2002-07       Impact factor: 5.911

9.  Acetylation-dependent chromatin reorganization by BRDT, a testis-specific bromodomain-containing protein.

Authors:  Christophe Pivot-Pajot; Cécile Caron; Jérôme Govin; Alexandre Vion; Sophie Rousseaux; Saadi Khochbin
Journal:  Mol Cell Biol       Date:  2003-08       Impact factor: 4.272

10.  Reversible arrest of proliferation of rat 3Y1 fibroblasts in both the G1 and G2 phases by trichostatin A.

Authors:  M Yoshida; T Beppu
Journal:  Exp Cell Res       Date:  1988-07       Impact factor: 3.905
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  55 in total

Review 1.  Visualizing dynamic activities of signaling enzymes using genetically encodable FRET-based biosensors from designs to applications.

Authors:  Xin Zhou; Katie J Herbst-Robinson; Jin Zhang
Journal:  Methods Enzymol       Date:  2012       Impact factor: 1.600

2.  Dissecting chromatin interactions in living cells from protein mobility maps.

Authors:  Fabian Erdel; Katharina Müller-Ott; Michael Baum; Malte Wachsmuth; Karsten Rippe
Journal:  Chromosome Res       Date:  2011-01       Impact factor: 5.239

3.  Structural basis for acetylated histone H4 recognition by the human BRD2 bromodomain.

Authors:  Takashi Umehara; Yoshihiro Nakamura; Moon Kyoo Jang; Kazumi Nakano; Akiko Tanaka; Keiko Ozato; Balasundaram Padmanabhan; Shigeyuki Yokoyama
Journal:  J Biol Chem       Date:  2010-01-04       Impact factor: 5.157

4.  Bromodomain protein Brd3 associates with acetylated GATA1 to promote its chromatin occupancy at erythroid target genes.

Authors:  Janine M Lamonica; Wulan Deng; Stephan Kadauke; Amy E Campbell; Roland Gamsjaeger; Hongxin Wang; Yong Cheng; Andrew N Billin; Ross C Hardison; Joel P Mackay; Gerd A Blobel
Journal:  Proc Natl Acad Sci U S A       Date:  2011-05-02       Impact factor: 11.205

Review 5.  Molecular advances in reporter genes: the need to witness the function of stem cells in failing heart in vivo.

Authors:  Silvia Agostini; Fabio A Recchia; Vincenzo Lionetti
Journal:  Stem Cell Rev Rep       Date:  2012-06       Impact factor: 5.739

Review 6.  Genetically encodable fluorescent biosensors for tracking signaling dynamics in living cells.

Authors:  Robert H Newman; Matthew D Fosbrink; Jin Zhang
Journal:  Chem Rev       Date:  2011-04-01       Impact factor: 60.622

Review 7.  Targeting bromodomains: epigenetic readers of lysine acetylation.

Authors:  Panagis Filippakopoulos; Stefan Knapp
Journal:  Nat Rev Drug Discov       Date:  2014-04-22       Impact factor: 84.694

8.  Identification of a BET family bromodomain/casein kinase II/TAF-containing complex as a regulator of mitotic condensin function.

Authors:  Hyun-Soo Kim; Rituparna Mukhopadhyay; Scott B Rothbart; Andrea C Silva; Vincent Vanoosthuyse; Ernest Radovani; Thomas Kislinger; Assen Roguev; Colm J Ryan; Jiewei Xu; Harlizawati Jahari; Kevin G Hardwick; Jack F Greenblatt; Nevan J Krogan; Jeffrey S Fillingham; Brian D Strahl; Eric E Bouhassira; Winfried Edelmann; Michael-Christopher Keogh
Journal:  Cell Rep       Date:  2014-02-22       Impact factor: 9.423

9.  Tissue-specific mitotic bookmarking by hematopoietic transcription factor GATA1.

Authors:  Stephan Kadauke; Maheshi I Udugama; Jan M Pawlicki; Jordan C Achtman; Deepti P Jain; Yong Cheng; Ross C Hardison; Gerd A Blobel
Journal:  Cell       Date:  2012-08-17       Impact factor: 41.582

10.  Brd4 engagement from chromatin targeting to transcriptional regulation: selective contact with acetylated histone H3 and H4.

Authors:  Cheng-Ming Chiang
Journal:  F1000 Biol Rep       Date:  2009-12-15
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