Literature DB >> 19805041

Niches and distributional areas: concepts, methods, and assumptions.

Jorge Soberón1, Miguel Nakamura.   

Abstract

Estimating actual and potential areas of distribution of species via ecological niche modeling has become a very active field of research, yet important conceptual issues in this field remain confused. We argue that conceptual clarity is enhanced by adopting restricted definitions of "niche" that enable operational definitions of basic concepts like fundamental, potential, and realized niches and potential and actual distributional areas. We apply these definitions to the question of niche conservatism, addressing what it is that is conserved and showing with a quantitative example how niche change can be measured. In this example, we display the extremely irregular structure of niche space, arguing that it is an important factor in understanding niche evolution. Many cases of apparently successful models of distributions ignore biotic factors: we suggest explanations to account for this paradox. Finally, relating the probability of observing a species to ecological factors, we address the issue of what objects are actually calculated by different niche modeling algorithms and stress the fact that methods that use only presence data calculate very different quantities than methods that use absence data. We conclude that the results of niche modeling exercises can be interpreted much better if the ecological and mathematical assumptions of the modeling process are made explicit.

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Year:  2009        PMID: 19805041      PMCID: PMC2780935          DOI: 10.1073/pnas.0901637106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  18 in total

1.  Museum specimen data predict crop damage by tropical rodents.

Authors:  V Sánchez-Cordero; E Martínez-Meyer
Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-20       Impact factor: 11.205

2.  Predicting distributions of known and unknown reptile species in Madagascar.

Authors:  Christopher J Raxworthy; Enrique Martinez-Meyer; Ned Horning; Ronald A Nussbaum; Gregory E Schneider; Miguel A Ortega-Huerta; A Townsend Peterson
Journal:  Nature       Date:  2003-12-18       Impact factor: 49.962

Review 3.  Predicting the geography of species' invasions via ecological niche modeling.

Authors:  A Townsend Peterson
Journal:  Q Rev Biol       Date:  2003-12       Impact factor: 4.875

4.  Evidence of climatic niche shift during biological invasion.

Authors:  O Broennimann; U A Treier; H Müller-Schärer; W Thuiller; A T Peterson; A Guisan
Journal:  Ecol Lett       Date:  2007-08       Impact factor: 9.492

Review 5.  Niche dynamics in space and time.

Authors:  Peter B Pearman; Antoine Guisan; Olivier Broennimann; Christophe F Randin
Journal:  Trends Ecol Evol       Date:  2008-03       Impact factor: 17.712

6.  Grinnellian and Eltonian niches and geographic distributions of species.

Authors:  Jorge Soberón
Journal:  Ecol Lett       Date:  2007-09-10       Impact factor: 9.492

Review 7.  Mechanistic niche modelling: combining physiological and spatial data to predict species' ranges.

Authors:  Michael Kearney; Warren Porter
Journal:  Ecol Lett       Date:  2009-04       Impact factor: 9.492

8.  Presence-only data and the em algorithm.

Authors:  Gill Ward; Trevor Hastie; Simon Barry; Jane Elith; John R Leathwick
Journal:  Biometrics       Date:  2009-06       Impact factor: 2.571

Review 9.  Conservatism and diversification of plant functional traits: Evolutionary rates versus phylogenetic signal.

Authors:  David Ackerly
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-20       Impact factor: 11.205

10.  Making mistakes when predicting shifts in species range in response to global warming.

Authors:  A J Davis; L S Jenkinson; J H Lawton; B Shorrocks; S Wood
Journal:  Nature       Date:  1998-02-19       Impact factor: 49.962

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  152 in total

Review 1.  The dynamics of biogeographic ranges in the deep sea.

Authors:  Craig R McClain; Sarah Mincks Hardy
Journal:  Proc Biol Sci       Date:  2010-07-28       Impact factor: 5.349

2.  Projected range contractions of montane biodiversity under global warming.

Authors:  Frank A La Sorte; Walter Jetz
Journal:  Proc Biol Sci       Date:  2010-06-09       Impact factor: 5.349

3.  Integrating phylogeography and physiology reveals divergence of thermal traits between central and peripheral lineages of tropical rainforest lizards.

Authors:  Craig Moritz; Gary Langham; Michael Kearney; Andrew Krockenberger; Jeremy VanDerWal; Stephen Williams
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2012-06-19       Impact factor: 6.237

4.  Does climate limit species richness by limiting individual species' ranges?

Authors:  Véronique Boucher-Lalonde; Jeremy T Kerr; David J Currie
Journal:  Proc Biol Sci       Date:  2013-12-18       Impact factor: 5.349

5.  Ecology and the ratchet of events: climate variability, niche dimensions, and species distributions.

Authors:  Stephen T Jackson; Julio L Betancourt; Robert K Booth; Stephen T Gray
Journal:  Proc Natl Acad Sci U S A       Date:  2009-09-23       Impact factor: 11.205

Review 6.  Hutchinson's duality: the once and future niche.

Authors:  Robert K Colwell; Thiago F Rangel
Journal:  Proc Natl Acad Sci U S A       Date:  2009-09-18       Impact factor: 11.205

Review 7.  Biogeography, changing climates, and niche evolution: Biogeography, changing climates, and niche evolution.

Authors:  David B Wake; Elizabeth A Hadly; David D Ackerly
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-16       Impact factor: 11.205

8.  Climatic extremes improve predictions of spatial patterns of tree species.

Authors:  Niklaus E Zimmermann; Nigel G Yoccoz; Thomas C Edwards; Eliane S Meier; Wilfried Thuiller; Antoine Guisan; Dirk R Schmatz; Peter B Pearman
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-06       Impact factor: 11.205

9.  Neotropical Leaf Litter Beetle Genus Motonerus (Coleoptera: Hydrophilidae): New Species, Distribution Data, and Description of Third Instar Larva.

Authors:  M Fikáček
Journal:  Neotrop Entomol       Date:  2019-05-09       Impact factor: 1.434

10.  Comments on the concept of ultra-low, cryptic tropical fruit fly populations.

Authors:  Andrew Paul Gutierrez; Luigi Ponti; Gianni Gilioli
Journal:  Proc Biol Sci       Date:  2014-03-11       Impact factor: 5.349

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