Literature DB >> 19802703

The worm solution: a chromosome-full of condensin helps gene expression go down.

Györgyi Csankovszki1, Emily L Petty, Karishma S Collette.   

Abstract

Dosage compensation in the nematode Caenorhabditis elegans is achieved by the binding of a condensin-like dosage compensation complex (DCC) to both X chromosomes in hermaphrodites to downregulate gene expression two-fold. Condensin I(DC), a sub-part of the DCC, differs from the mitotic condensin I complex by a single subunit, strengthening the connection between dosage compensation and mitotic chromosome condensation. The DCC is targeted to X chromosomes by initial binding to a number of recruiting elements, followed by dispersal or spreading to secondary sites. While the complex is greatly enriched on the X chromosomes, many sites on autosomes also bind the complex. DCC binding does not correlate with DCC-mediated repression, suggesting that the complex acts in a chromosome-wide manner, rather than on a gene-by-gene basis. Worm dosage compensation represents an excellent model system to study how condensin-mediated changes in higher order chromatin organization affect gene expression.

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Year:  2009        PMID: 19802703      PMCID: PMC2992697          DOI: 10.1007/s10577-009-9061-y

Source DB:  PubMed          Journal:  Chromosome Res        ISSN: 0967-3849            Impact factor:   5.239


  86 in total

1.  The primary sex determination signal of Caenorhabditis elegans.

Authors:  I Carmi; B J Meyer
Journal:  Genetics       Date:  1999-07       Impact factor: 4.562

2.  13S condensin actively reconfigures DNA by introducing global positive writhe: implications for chromosome condensation.

Authors:  K Kimura; V V Rybenkov; N J Crisona; T Hirano; N R Cozzarelli
Journal:  Cell       Date:  1999-07-23       Impact factor: 41.582

3.  Xist yeast artificial chromosome transgenes function as X-inactivation centers only in multicopy arrays and not as single copies.

Authors:  E Heard; F Mongelard; D Arnaud; P Avner
Journal:  Mol Cell Biol       Date:  1999-04       Impact factor: 4.272

4.  Revisiting the X:A signal that specifies Caenorhabditis elegans sexual fate.

Authors:  John M Gladden; Behnom Farboud; Barbara J Meyer
Journal:  Genetics       Date:  2007-10-18       Impact factor: 4.562

5.  A ONECUT homeodomain protein communicates X chromosome dose to specify Caenorhabditis elegans sexual fate by repressing a sex switch gene.

Authors:  John M Gladden; Barbara J Meyer
Journal:  Genetics       Date:  2007-08-24       Impact factor: 4.562

6.  Dosage compensation proteins targeted to X chromosomes by a determinant of hermaphrodite fate.

Authors:  H E Dawes; D S Berlin; D M Lapidus; C Nusbaum; T L Davis; B J Meyer
Journal:  Science       Date:  1999-06-11       Impact factor: 47.728

Review 7.  Karyotype, ploidy, and gene dosage.

Authors:  Jonathan Hodgkin
Journal:  WormBook       Date:  2005-06-25

8.  Global gene expression profiling reveals similarities and differences among mouse pluripotent stem cells of different origins and strains.

Authors:  Lioudmila V Sharova; Alexei A Sharov; Yulan Piao; Nabeebi Shaik; Terry Sullivan; Colin L Stewart; Brigid L M Hogan; Minoru S H Ko
Journal:  Dev Biol       Date:  2007-05-10       Impact factor: 3.582

9.  Condensin restructures chromosomes in preparation for meiotic divisions.

Authors:  Raymond C Chan; Aaron F Severson; Barbara J Meyer
Journal:  J Cell Biol       Date:  2004-11-22       Impact factor: 10.539

10.  Cumulative contributions of weak DNA determinants to targeting the Drosophila dosage compensation complex.

Authors:  Gregor D Gilfillan; Cornelia König; Ina K Dahlsveen; Nicky Prakoura; Tobias Straub; Rosemarie Lamm; Torsten Fauth; Peter B Becker
Journal:  Nucleic Acids Res       Date:  2007-05-05       Impact factor: 16.971

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  13 in total

1.  Linking dosage compensation and X chromosome nuclear organization in C. elegans.

Authors:  Rahul Sharma; Peter Meister
Journal:  Nucleus       Date:  2015-06-09       Impact factor: 4.197

Review 2.  Condensins: universal organizers of chromosomes with diverse functions.

Authors:  Tatsuya Hirano
Journal:  Genes Dev       Date:  2012-08-01       Impact factor: 11.361

3.  Contrasting roles of condensin I and condensin II in mitotic chromosome formation.

Authors:  Lydia C Green; Paul Kalitsis; Tsz M Chang; Miri Cipetic; Ji Hun Kim; Owen Marshall; Lynne Turnbull; Cynthia B Whitchurch; Paola Vagnarelli; Kumiko Samejima; William C Earnshaw; K H Andy Choo; Damien F Hudson
Journal:  J Cell Sci       Date:  2012-02-17       Impact factor: 5.285

4.  Caenorhabditis elegans dosage compensation regulates histone H4 chromatin state on X chromosomes.

Authors:  Michael B Wells; Martha J Snyder; Laura M Custer; Gyorgyi Csankovszki
Journal:  Mol Cell Biol       Date:  2012-03-05       Impact factor: 4.272

Review 5.  DNA repair and genome maintenance in Bacillus subtilis.

Authors:  Justin S Lenhart; Jeremy W Schroeder; Brian W Walsh; Lyle A Simmons
Journal:  Microbiol Mol Biol Rev       Date:  2012-09       Impact factor: 11.056

6.  The onset of C. elegans dosage compensation is linked to the loss of developmental plasticity.

Authors:  Laura M Custer; Martha J Snyder; Kerry Flegel; Györgyi Csankovszki
Journal:  Dev Biol       Date:  2013-11-16       Impact factor: 3.582

7.  Regulation of DCC localization by HTZ-1/H2A.Z and DPY-30 does not correlate with H3K4 methylation levels.

Authors:  Emily Petty; Emily Laughlin; Györgyi Csankovszki
Journal:  PLoS One       Date:  2011-10-05       Impact factor: 3.240

8.  The C. elegans dosage compensation complex mediates interphase X chromosome compaction.

Authors:  Alyssa C Lau; Kentaro Nabeshima; Györgyi Csankovszki
Journal:  Epigenetics Chromatin       Date:  2014-10-27       Impact factor: 4.954

Review 9.  Condensin-mediated chromosome organization and gene regulation.

Authors:  Alyssa C Lau; Györgyi Csankovszki
Journal:  Front Genet       Date:  2015-01-13       Impact factor: 4.599

10.  Finding a balance: how diverse dosage compensation strategies modify histone h4 to regulate transcription.

Authors:  Michael B Wells; Györgyi Csankovszki; Laura M Custer
Journal:  Genet Res Int       Date:  2011-10-19
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