Literature DB >> 19800252

ATF4-dependent transcription mediates signaling of amino acid limitation.

Michael S Kilberg1, Jixiu Shan, Nan Su.   

Abstract

Mammals respond to dietary nutrient fluctuations; for example, deficiency of dietary protein or an imbalance of essential amino acids activates an amino acid response (AAR) signal transduction pathway, consisting of detection of uncharged tRNA by the GCN2 kinase, eIF2alpha phosphorylation and ATF4 expression. In concert with heterodimerization partners, ATF4 activates specific genes via a CCAAT-enhancer binding protein-activating transcription factor response element (CARE). This review outlines the ATF4-dependent transcriptional mechanisms associated with the AAR, focusing on progress during the past 5 years. Recent evidence suggests that maternal nutrient deprivation not only has immediate metabolic effects on the fetus, but also triggers gene expression changes in adulthood, possibly through epigenetic mechanisms. Therefore, understanding the transcriptional programs initiated by amino acid limitation is crucial and timely.

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Year:  2009        PMID: 19800252      PMCID: PMC3587693          DOI: 10.1016/j.tem.2009.05.008

Source DB:  PubMed          Journal:  Trends Endocrinol Metab        ISSN: 1043-2760            Impact factor:   12.015


  80 in total

Review 1.  Nutritional control of gene expression: how mammalian cells respond to amino acid limitation.

Authors:  M S Kilberg; Y-X Pan; H Chen; V Leung-Pineda
Journal:  Annu Rev Nutr       Date:  2005       Impact factor: 11.848

2.  Amino acid limitation regulates the expression of genes involved in several specific biological processes through GCN2-dependent and GCN2-independent pathways.

Authors:  Christiane Deval; Cédric Chaveroux; Anne-Catherine Maurin; Yoan Cherasse; Laurent Parry; Valérie Carraro; Dragan Milenkovic; Marc Ferrara; Alain Bruhat; Céline Jousse; Pierre Fafournoux
Journal:  FEBS J       Date:  2008-12-19       Impact factor: 5.542

3.  TRB3, a novel ER stress-inducible gene, is induced via ATF4-CHOP pathway and is involved in cell death.

Authors:  Nobumichi Ohoka; Satoshi Yoshii; Takayuki Hattori; Kikuo Onozaki; Hidetoshi Hayashi
Journal:  EMBO J       Date:  2005-03-10       Impact factor: 11.598

4.  Uncharged tRNA and sensing of amino acid deficiency in mammalian piriform cortex.

Authors:  Shuzhen Hao; James W Sharp; Catherine M Ross-Inta; Brent J McDaniel; Tracy G Anthony; Ronald C Wek; Douglas R Cavener; Barbara C McGrath; John B Rudell; Thomas J Koehnle; Dorothy W Gietzen
Journal:  Science       Date:  2005-03-18       Impact factor: 47.728

5.  Dietary protein restriction of pregnant rats induces and folic acid supplementation prevents epigenetic modification of hepatic gene expression in the offspring.

Authors:  Karen A Lillycrop; Emma S Phillips; Alan A Jackson; Mark A Hanson; Graham C Burdge
Journal:  J Nutr       Date:  2005-06       Impact factor: 4.798

6.  Characterization of human NIPK (TRB3, SKIP3) gene activation in stressful conditions.

Authors:  Daima Ord; Tõnis Ord
Journal:  Biochem Biophys Res Commun       Date:  2005-04-29       Impact factor: 3.575

7.  An upstream open reading frame regulates translation of GADD34 during cellular stresses that induce eIF2alpha phosphorylation.

Authors:  Yun-Young Lee; Randal C Cevallos; Eric Jan
Journal:  J Biol Chem       Date:  2009-01-08       Impact factor: 5.157

8.  C/EBP homology protein (CHOP) interacts with activating transcription factor 4 (ATF4) and negatively regulates the stress-dependent induction of the asparagine synthetase gene.

Authors:  Nan Su; Michael S Kilberg
Journal:  J Biol Chem       Date:  2008-10-21       Impact factor: 5.157

9.  ATF4 is necessary and sufficient for ER stress-induced upregulation of REDD1 expression.

Authors:  Michael L Whitney; Leonard S Jefferson; Scot R Kimball
Journal:  Biochem Biophys Res Commun       Date:  2008-12-27       Impact factor: 3.575

Review 10.  Molecular mechanisms of mTOR-mediated translational control.

Authors:  Xiaoju Max Ma; John Blenis
Journal:  Nat Rev Mol Cell Biol       Date:  2009-04-02       Impact factor: 94.444

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  238 in total

Review 1.  The cystine/glutamate antiporter system x(c)(-) in health and disease: from molecular mechanisms to novel therapeutic opportunities.

Authors:  Jan Lewerenz; Sandra J Hewett; Ying Huang; Maria Lambros; Peter W Gout; Peter W Kalivas; Ann Massie; Ilse Smolders; Axel Methner; Mathias Pergande; Sylvia B Smith; Vadivel Ganapathy; Pamela Maher
Journal:  Antioxid Redox Signal       Date:  2012-08-03       Impact factor: 8.401

2.  Impaired nutrient signaling and body weight control in a Na+ neutral amino acid cotransporter (Slc6a19)-deficient mouse.

Authors:  Angelika Bröer; Torsten Juelich; Jessica M Vanslambrouck; Nadine Tietze; Peter S Solomon; Jeff Holst; Charles G Bailey; John E J Rasko; Stefan Bröer
Journal:  J Biol Chem       Date:  2011-06-02       Impact factor: 5.157

3.  Transcriptional control of amino acid homeostasis is disrupted in Huntington's disease.

Authors:  Juan I Sbodio; Solomon H Snyder; Bindu D Paul
Journal:  Proc Natl Acad Sci U S A       Date:  2016-07-19       Impact factor: 11.205

4.  2-Phenyl-APB-144-Induced Retinal Pigment Epithelium Degeneration and Its Underlying Mechanisms.

Authors:  Shin-ichiro Hirai; Hiroaki Kurashima; Daisuke Nakamura; Tomoko Komatsu; Yuki Yasuda; Sayo Habashita-Obata; Sanae Ichikawa; Osamu Katsuta; Takao Iwawaki; Kenji Kohno
Journal:  J Ocul Pharmacol Ther       Date:  2015-08-27       Impact factor: 2.671

5.  Surgical stress resistance induced by single amino acid deprivation requires Gcn2 in mice.

Authors:  Wei Peng; Lauren Robertson; Jordan Gallinetti; Pedro Mejia; Sarah Vose; Allison Charlip; Timothy Chu; James R Mitchell
Journal:  Sci Transl Med       Date:  2012-01-25       Impact factor: 17.956

Review 6.  The transcription factor network associated with the amino acid response in mammalian cells.

Authors:  Michael S Kilberg; Mukundh Balasubramanian; Lingchen Fu; Jixiu Shan
Journal:  Adv Nutr       Date:  2012-05-01       Impact factor: 8.701

Review 7.  The SLC38 family of sodium-amino acid co-transporters.

Authors:  Stefan Bröer
Journal:  Pflugers Arch       Date:  2013-11-06       Impact factor: 3.657

Review 8.  Asparagine synthetase: Function, structure, and role in disease.

Authors:  Carrie L Lomelino; Jacob T Andring; Robert McKenna; Michael S Kilberg
Journal:  J Biol Chem       Date:  2017-10-30       Impact factor: 5.157

9.  Upregulation of capacity for glutathione synthesis in response to amino acid deprivation: regulation of glutamate-cysteine ligase subunits.

Authors:  Angelos K Sikalidis; Kevin M Mazor; Jeong-In Lee; Heather B Roman; Lawrence L Hirschberger; Martha H Stipanuk
Journal:  Amino Acids       Date:  2014-02-21       Impact factor: 3.520

10.  ATF4 is directly recruited by TLR4 signaling and positively regulates TLR4-trigged cytokine production in human monocytes.

Authors:  Chunyan Zhang; Nan Bai; Antao Chang; Zhuhong Zhang; Jing Yin; Wenzhi Shen; Yaping Tian; Rong Xiang; Chenghu Liu
Journal:  Cell Mol Immunol       Date:  2012-12-17       Impact factor: 11.530

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