Literature DB >> 19792036

From puffs to global Ca2+ signals: how molecular properties shape global signals.

Alexander Skupin1, Martin Falcke.   

Abstract

The universality of Ca(2+) as second messenger in living cells is achieved by a rich spectrum of spatiotemporal cellular concentration dynamics. Ca(2+) release from internal storage compartments plays a key role in shaping cytosolic Ca(2+) signals. Deciphering this signaling mechanism is essential for a deeper understanding of its physiological function and general concepts of cell signaling. Here, we review recent experimental findings demonstrating the stochasticity of Ca(2+) oscillations and its relevance for modeling Ca(2+) dynamics. The stochasticity arises by the hierarchical signal structure that carries molecular fluctuations of single channels onto the level of the cell leading to a stochastic medium as theoretically predicted. The result contradicts the current opinion of Ca(2+) being a cellular oscillator. We demonstrate that cells use array enhanced coherence resonance to form rather regular spiking signals and that the "oscillations" carry information despite the involved stochasticity. The knowledge on the underlying mechanism also allows for determination of intrinsic properties from global observations. In the second part of the paper, we briefly survey different modeling approaches with regard to the experimental results. We focus on the dependence of the standard deviation on the mean period of the oscillations. It shows that limit cycle oscillations cannot describe the experimental data and that generic models have to include the spatial aspects of Ca(2+) signaling.

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Year:  2009        PMID: 19792036     DOI: 10.1063/1.3184537

Source DB:  PubMed          Journal:  Chaos        ISSN: 1054-1500            Impact factor:   3.642


  14 in total

1.  The emergence of subcellular pacemaker sites for calcium waves and oscillations.

Authors:  Michael Nivala; Christopher Y Ko; Melissa Nivala; James N Weiss; Zhilin Qu
Journal:  J Physiol       Date:  2013-09-16       Impact factor: 5.182

2.  Stochastic initiation and termination of calcium-mediated triggered activity in cardiac myocytes.

Authors:  Zhen Song; Zhilin Qu; Alain Karma
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-03       Impact factor: 11.205

Review 3.  Approaching the molecular origins of collective dynamics in oscillating cell populations.

Authors:  Pankaj Mehta; Thomas Gregor
Journal:  Curr Opin Genet Dev       Date:  2010-10-09       Impact factor: 5.578

4.  Exact stochastic simulation of a calcium microdomain reveals the impact of Ca²⁺ fluctuations on IP₃R gating.

Authors:  Nicolas Wieder; Rainer Fink; Frederic von Wegner
Journal:  Biophys J       Date:  2015-02-03       Impact factor: 4.033

5.  Calcium signals driven by single channel noise.

Authors:  Alexander Skupin; Helmut Kettenmann; Martin Falcke
Journal:  PLoS Comput Biol       Date:  2010-08-05       Impact factor: 4.475

6.  Observations of calcium dynamics in cortical secretory vesicles.

Authors:  Adi Raveh; Michael Valitsky; Liora Shani; Jens R Coorssen; Paul S Blank; Joshua Zimmerberg; Rami Rahamimoff
Journal:  Cell Calcium       Date:  2012-07-24       Impact factor: 6.817

7.  Modulation of elementary calcium release mediates a transition from puffs to waves in an IP3R cluster model.

Authors:  Martin Rückl; Ian Parker; Jonathan S Marchant; Chamakuri Nagaiah; Friedrich W Johenning; Sten Rüdiger
Journal:  PLoS Comput Biol       Date:  2015-01-08       Impact factor: 4.475

8.  Hierarchic stochastic modelling applied to intracellular Ca(2+) signals.

Authors:  Gregor Moenke; Martin Falcke; Keven Thurley
Journal:  PLoS One       Date:  2012-12-27       Impact factor: 3.240

9.  Multiscale Modeling Indicates That Temperature Dependent [Ca2+]i Spiking in Astrocytes Is Quantitatively Consistent with Modulated SERCA Activity.

Authors:  Niko Komin; Mahsa Moein; Mark H Ellisman; Alexander Skupin
Journal:  Neural Plast       Date:  2015-08-04       Impact factor: 3.599

10.  A positive feedback cell signaling nucleation model of astrocyte dynamics.

Authors:  Christopher L Macdonald; Gabriel A Silva
Journal:  Front Neuroeng       Date:  2013-07-10
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