Literature DB >> 19786185

The use of carrier RNA to enhance DNA extraction from microfluidic-based silica monoliths.

Kirsty J Shaw1, Lauren Thain, Peter T Docker, Charlotte E Dyer, John Greenman, Gillian M Greenway, Stephen J Haswell.   

Abstract

DNA extraction was carried out on silica-based monoliths within a microfluidic device. Solid-phase DNA extraction methodology was applied in which the DNA binds to silica in the presence of a chaotropic salt, such as guanidine hydrochloride, and is eluted in a low ionic strength solution, such as water. The addition of poly-A carrier RNA to the chaotropic salt solution resulted in a marked increase in the effective amount of DNA that could be recovered (25ng) compared to the absence of RNA (5ng) using the silica-based monolith. These findings confirm that techniques utilising nucleic acid carrier molecules can enhance DNA extraction methodologies in microfluidic applications.

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Year:  2009        PMID: 19786185     DOI: 10.1016/j.aca.2009.03.038

Source DB:  PubMed          Journal:  Anal Chim Acta        ISSN: 0003-2670            Impact factor:   6.558


  11 in total

1.  A self-contained polymeric cartridge for automated biological sample preparation.

Authors:  Guolin Xu; Daniel Yoke San Lee; Hong Xie; Deon Chiew; Tseng-Ming Hsieh; Emril Mohamed Ali; Xing Lun Looi; Mo-Huang Li; Jackie Y Ying
Journal:  Biomicrofluidics       Date:  2011-07-25       Impact factor: 2.800

2.  Adsorption and isolation of nucleic acids on cellulose magnetic beads using a three-dimensional printed microfluidic chip.

Authors:  Lei Zhang; Rachel N Deraney; Anubhav Tripathi
Journal:  Biomicrofluidics       Date:  2015-12-23       Impact factor: 2.800

3.  Evaluation of carrier RNA and low volume demineralization for recovery of nuclear DNA from human teeth.

Authors:  Denice Higgins; John Kaidonis; Grant Townsend; Jeremy J Austin
Journal:  Forensic Sci Med Pathol       Date:  2014-01-08       Impact factor: 2.007

4.  Evaluation of extraction methods for methylated cell-free fetal DNA from maternal plasma.

Authors:  Ji Hyae Lim; Bom Yi Lee; Jin Woo Kim; You Jung Han; Jin Hoon Chung; Min Hyoung Kim; Dong Wook Kwak; So Yeon Park; Hee Back Choi; Hyun Mee Ryu
Journal:  J Assist Reprod Genet       Date:  2018-02-08       Impact factor: 3.412

5.  Biases during DNA extraction affect bacterial and archaeal community profile of anaerobic digestion samples.

Authors:  Ashira Roopnarain; Mashudu Mukhuba; Rasheed Adeleke; Mokhele Moeletsi
Journal:  3 Biotech       Date:  2017-10-23       Impact factor: 2.406

6.  Methods for the Isolation and Study of Exovesicle DNA from Trypanosomatid Parasites.

Authors:  Lina María Orrego; Romina Romero; Antonio Osuna; Luis M De Pablos
Journal:  Methods Mol Biol       Date:  2021

7.  Vortex- and Centrifugation-Free Extraction of HIV-1 RNA.

Authors:  Rachel N Deraney; Derek Troiano; Richard Joseph; Soya S Sam; Angela M Caliendo; Anubhav Tripathi
Journal:  Mol Diagn Ther       Date:  2019-06       Impact factor: 4.476

Review 8.  Simple Approaches to Minimally-Instrumented, Microfluidic-Based Point-of-Care Nucleic Acid Amplification Tests.

Authors:  Michael G Mauk; Jinzhao Song; Changchun Liu; Haim H Bau
Journal:  Biosensors (Basel)       Date:  2018-02-26

9.  High-throughput isolation of circulating tumor DNA: a comparison of automated platforms.

Authors:  Lisanne F van Dessel; Silvia R Vitale; Jean C A Helmijr; Saskia M Wilting; Michelle van der Vlugt-Daane; Esther Oomen-de Hoop; Stefan Sleijfer; John W M Martens; Maurice P H M Jansen; Martijn P Lolkema
Journal:  Mol Oncol       Date:  2018-12-22       Impact factor: 6.603

10.  Touch DNA in forensic science: The use of laboratory-created eccrine fingerprints to quantify DNA loss.

Authors:  Jessica Tang; Jennifer Ostrander; Ray Wickenheiser; Ashley Hall
Journal:  Forensic Sci Int       Date:  2019-10-23       Impact factor: 2.395

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