Literature DB >> 19781935

Genetic and optical targeting of neural circuits and behavior--zebrafish in the spotlight.

Herwig Baier1, Ethan K Scott.   

Abstract

Methods to label neurons and to monitor their activity with genetically encoded fluorescent reporters have been a staple of neuroscience research for several years. The recent introduction of photoswitchable ion channels and pumps, such as channelrhodopsin (ChR2), halorhodopsin (NpHR), and light-gated glutamate receptor (LiGluR), is enabling remote optical manipulation of neuronal activity. The translucent brains of zebrafish offer superior experimental conditions for optogenetic approaches in vivo. Enhancer and gene trapping approaches have generated hundreds of Gal4 driver lines in which the expression of UAS-linked effectors can be targeted to subpopulations of neurons. Local photoactivation of genetically targeted LiGluR, ChR2, or NpHR has uncovered novel functions for specific areas and cell types in zebrafish behavior. Because the manipulation is restricted to times and places where genetics (cell types) and optics (beams of light) intersect, this method affords excellent resolving power for the functional analysis of neural circuitry.

Entities:  

Mesh:

Year:  2009        PMID: 19781935      PMCID: PMC2787859          DOI: 10.1016/j.conb.2009.08.001

Source DB:  PubMed          Journal:  Curr Opin Neurobiol        ISSN: 0959-4388            Impact factor:   6.627


  54 in total

1.  Functional imaging reveals rapid development of visual response properties in the zebrafish tectum.

Authors:  Cristopher M Niell; Stephen J Smith
Journal:  Neuron       Date:  2005-03-24       Impact factor: 17.173

2.  All optical interface for parallel, remote, and spatiotemporal control of neuronal activity.

Authors:  Sheng Wang; Stephanie Szobota; Yuan Wang; Matthew Volgraf; Zhaowei Liu; Cheng Sun; Dirk Trauner; Ehud Y Isacoff; Xiang Zhang
Journal:  Nano Lett       Date:  2007-11-23       Impact factor: 11.189

3.  Genetic single-cell mosaic analysis implicates ephrinB2 reverse signaling in projections from the posterior tectum to the hindbrain in zebrafish.

Authors:  Tomomi Sato; Takanori Hamaoka; Hidenori Aizawa; Toshihiko Hosoya; Hitoshi Okamoto
Journal:  J Neurosci       Date:  2007-05-16       Impact factor: 6.167

4.  Olfactory neural circuitry for attraction to amino acids revealed by transposon-mediated gene trap approach in zebrafish.

Authors:  Tetsuya Koide; Nobuhiko Miyasaka; Kozo Morimoto; Kazuhide Asakawa; Akihiro Urasaki; Koichi Kawakami; Yoshihiro Yoshihara
Journal:  Proc Natl Acad Sci U S A       Date:  2009-06-03       Impact factor: 11.205

5.  In-depth activation of channelrhodopsin 2-sensitized excitable cells with high spatial resolution using two-photon excitation with a near-infrared laser microbeam.

Authors:  Samarendra K Mohanty; Rainer K Reinscheid; Xiaobin Liu; Naoe Okamura; Tatiana B Krasieva; Michael W Berns
Journal:  Biophys J       Date:  2008-07-11       Impact factor: 4.033

6.  Functional role of a specialized class of spinal commissural inhibitory neurons during fast escapes in zebrafish.

Authors:  Chie Satou; Yukiko Kimura; Tsunehiko Kohashi; Kazuki Horikawa; Hiroyuki Takeda; Yoichi Oda; Shin-ichi Higashijima
Journal:  J Neurosci       Date:  2009-05-27       Impact factor: 6.167

7.  Channelrhodopsin-2, a directly light-gated cation-selective membrane channel.

Authors:  Georg Nagel; Tanjef Szellas; Wolfram Huhn; Suneel Kateriya; Nona Adeishvili; Peter Berthold; Doris Ollig; Peter Hegemann; Ernst Bamberg
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-13       Impact factor: 11.205

8.  Targeted gene expression as a means of altering cell fates and generating dominant phenotypes.

Authors:  A H Brand; N Perrimon
Journal:  Development       Date:  1993-06       Impact factor: 6.868

9.  Semi-automated reconstruction of neural processes from large numbers of fluorescence images.

Authors:  Ju Lu; John C Fiala; Jeff W Lichtman
Journal:  PLoS One       Date:  2009-05-21       Impact factor: 3.240

10.  Genetic and physiologic dissection of the vertebrate cardiac conduction system.

Authors:  Neil C Chi; Robin M Shaw; Benno Jungblut; Jan Huisken; Tania Ferrer; Rima Arnaout; Ian Scott; Dimitris Beis; Tong Xiao; Herwig Baier; Lily Y Jan; Martin Tristani-Firouzi; Didier Y R Stainier
Journal:  PLoS Biol       Date:  2008-05-13       Impact factor: 8.029

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  42 in total

1.  Development and implementation of a three-choice serial reaction time task for zebrafish (Danio rerio).

Authors:  Matthew O Parker; Mollie E Millington; Fraser J Combe; Caroline H Brennan
Journal:  Behav Brain Res       Date:  2011-10-31       Impact factor: 3.332

2.  Filtering of visual information in the tectum by an identified neural circuit.

Authors:  Filippo Del Bene; Claire Wyart; Estuardo Robles; Amanda Tran; Loren Looger; Ethan K Scott; Ehud Y Isacoff; Herwig Baier
Journal:  Science       Date:  2010-10-29       Impact factor: 47.728

Review 3.  Movement, technology and discovery in the zebrafish.

Authors:  David L McLean; Joseph R Fetcho
Journal:  Curr Opin Neurobiol       Date:  2010-10-20       Impact factor: 6.627

4.  High-resolution optical control of spatiotemporal neuronal activity patterns in zebrafish using a digital micromirror device.

Authors:  Peixin Zhu; Otto Fajardo; Jennifer Shum; Yan-Ping Zhang Schärer; Rainer W Friedrich
Journal:  Nat Protoc       Date:  2012-06-28       Impact factor: 13.491

5.  Descending control of swim posture by a midbrain nucleus in zebrafish.

Authors:  Tod R Thiele; Joseph C Donovan; Herwig Baier
Journal:  Neuron       Date:  2014-07-24       Impact factor: 17.173

Review 6.  Optogenetic investigation of neural circuits in vivo.

Authors:  Matthew E Carter; Luis de Lecea
Journal:  Trends Mol Med       Date:  2011-02-23       Impact factor: 11.951

Review 7.  Investigating the genetics of visual processing, function and behaviour in zebrafish.

Authors:  Sabine L Renninger; Helia B Schonthaler; Stephan C F Neuhauss; Ralf Dahm
Journal:  Neurogenetics       Date:  2011-01-26       Impact factor: 2.660

Review 8.  Synapses in the spotlight with synthetic optogenetics.

Authors:  Shai Berlin; Ehud Y Isacoff
Journal:  EMBO Rep       Date:  2017-04-10       Impact factor: 8.807

9.  A resource for manipulating gene expression and analyzing cis-regulatory modules in the Drosophila CNS.

Authors:  Laurina Manning; Ellie S Heckscher; Maria D Purice; Jourdain Roberts; Alysha L Bennett; Jason R Kroll; Jill L Pollard; Marie E Strader; Josh R Lupton; Anna V Dyukareva; Phuong Nam Doan; David M Bauer; Allison N Wilbur; Stephanie Tanner; Jimmy J Kelly; Sen-Lin Lai; Khoa D Tran; Minoree Kohwi; Todd R Laverty; Joseph C Pearson; Stephen T Crews; Gerald M Rubin; Chris Q Doe
Journal:  Cell Rep       Date:  2012-10-11       Impact factor: 9.423

10.  Optogenetic Dissection of Neuronal Circuits in Zebrafish using Viral Gene Transfer and the Tet System.

Authors:  Peixin Zhu; Yuichi Narita; Sebastian T Bundschuh; Otto Fajardo; Yan-Ping Zhang Schärer; Bidisha Chattopadhyaya; Estelle Arn Bouldoires; Anna Ewa Stepien; Karl Deisseroth; Silvia Arber; Rolf Sprengel; Filippo M Rijli; Rainer W Friedrich
Journal:  Front Neural Circuits       Date:  2009-12-11       Impact factor: 3.492

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