Literature DB >> 19777370

Molecular analysis of an actin gene, CarACT1, from chickpea (Cicer arietinum L.).

Hui Peng1, Huiying Cheng, Xingwang Yu, Qinghua Shi, Hua Zhang, Jiangui Li, Hao Ma.   

Abstract

Actins are ubiquitous and highly conserved proteins that play key roles in cell formation and cellular activities. In this study, an actin gene was isolated from chickpea for the first time and designated as CarACT1 (for Cicer arietinum L. actin gene 1; Genbank accession no. EU529707). It encoded a putative protein with 377 amino acids and contained five exons and four introns within genomic DNA sequence. CarACT1 was localized in cytoplasm and showed high similarity to other well known actins from various species. Reverse transcription-polymerase chain reaction (RT-PCR) assay proved that CarACT1 transcripts were ubiquitously accumulated in all major organs, such as seedling roots, stems, leaves, flowers, young pods, and seeds, as well as in diverse developmental stages, such as leaf senescence, seed development and germination. Our results suggested that CarACT1 is an actin gene with physiological functions and may be served as a potential reference gene for transcription level of interesting genes in chickpea.

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Year:  2010        PMID: 19777370     DOI: 10.1007/s11033-009-9844-4

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  33 in total

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4.  Comparative analysis of ESTs in response to drought stress in chickpea (C. arietinum L.).

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Journal:  Biochem Biophys Res Commun       Date:  2008-09-17       Impact factor: 3.575

5.  Protein structure alignment by incremental combinatorial extension (CE) of the optimal path.

Authors:  I N Shindyalov; P E Bourne
Journal:  Protein Eng       Date:  1998-09

6.  The actin gene of the glaucocystophyte Cyanophora paradoxa: analysis of the coding region and introns, and an actin phylogeny of eukaryotes.

Authors:  D Bhattacharya; K Weber
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7.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

8.  Transient expression assays with the proximal promoter of a newly characterized actin gene from the oyster Crassostrea gigas.

Authors:  J P Cadoret; R Debón; L Cornudella; V Lardans; A Morvan; P Roch; V Boulo
Journal:  FEBS Lett       Date:  1999-10-22       Impact factor: 4.124

9.  Independent gene evolution in the potato actin gene family demonstrated by phylogenetic procedures for resolving gene conversions and the phylogeny of angiosperm actin genes.

Authors:  G Drouin; G A Dover
Journal:  J Mol Evol       Date:  1990-08       Impact factor: 2.395

Review 10.  Actin and endocytosis: mechanisms and phylogeny.

Authors:  Brian J Galletta; John A Cooper
Journal:  Curr Opin Cell Biol       Date:  2009-01-29       Impact factor: 8.382

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  1 in total

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  1 in total

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