Literature DB >> 19777277

Single flexible and semiflexible polymers at high shear: non-monotonic and non-universal stretching response.

C Sendner1, R R Netz.   

Abstract

Using Brownian hydrodynamic simulation techniques, we study single polymers in shear. We investigate the effects of hydrodynamic interactions, excluded volume, chain extensibility, chain length and semiflexibility. The well-known stretching behavior with increasing shear rate [Formula: see text] is only observed for low shear [Formula: see text] < [Formula: see text] , where [Formula: see text] is the shear rate at maximum polymer extension. For intermediate shear rates [Formula: see text] < [Formula: see text] < [Formula: see text] the radius of gyration decreases with increasing shear with minimum chain extension at [Formula: see text] . For even higher shear [Formula: see text] < [Formula: see text] the chain exhibits again shear stretching. This non-monotonic stretching behavior is obtained in the presence of excluded-volume and hydrodynamic interactions for sufficiently long and inextensible flexible polymers, while it is completely absent for Gaussian extensible chains. We establish the heuristic scaling laws [Formula: see text] approximately N (-1.4) and [Formula: see text] approximately N (0.7) as a function of chain length N , which implies that the regime of shear-induced chain compression widens with increasing chain length. These scaling laws also imply that the chain response at high shear rates is not a universal function of the Weissenberg number Wi = [Formula: see text] [Formula: see text] anymore, where [Formula: see text] is the equilibrium relaxation time. For semiflexible polymers a similar non-monotonic stretching response is obtained. By extrapolating the simulation results to lengths corresponding to experimentally studied DNA molecules, we find that the shear rate [Formula: see text] to reach the compression regime is experimentally realizable.

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Year:  2009        PMID: 19777277     DOI: 10.1140/epje/i2009-10509-4

Source DB:  PubMed          Journal:  Eur Phys J E Soft Matter        ISSN: 1292-8941            Impact factor:   1.890


  6 in total

1.  Shear-induced migration in flowing polymer solutions: simulation of long-chain DNA in microchannels [corrected].

Authors:  Richard M Jendrejack; David C Schwartz; Juan J de Pablo; Michael D Graham
Journal:  J Chem Phys       Date:  2004-02-01       Impact factor: 3.488

2.  Semiflexible polymers in shear flow.

Authors:  Roland G Winkler
Journal:  Phys Rev Lett       Date:  2006-09-18       Impact factor: 9.161

3.  Comparison of dissipative particle dynamics and Langevin thermostats for out-of-equilibrium simulations of polymeric systems.

Authors:  C Pastorino; T Kreer; M Müller; K Binder
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2007-08-24

Review 4.  Flexibility of DNA.

Authors:  P J Hagerman
Journal:  Annu Rev Biophys Biophys Chem       Date:  1988

5.  Characteristic periodic motion of polymers in shear flow.

Authors:  Charles M Schroeder; Rodrigo E Teixeira; Eric S G Shaqfeh; Steven Chu
Journal:  Phys Rev Lett       Date:  2005-07-01       Impact factor: 9.161

6.  Single-polymer dynamics in steady shear flow.

Authors:  D E Smith; H P Babcock; S Chu
Journal:  Science       Date:  1999-03-12       Impact factor: 47.728

  6 in total
  4 in total

1.  Shear-Induced Unfolding and Enzymatic Cleavage of Full-Length VWF Multimers.

Authors:  Svenja Lippok; Matthias Radtke; Tobias Obser; Lars Kleemeier; Reinhard Schneppenheim; Ulrich Budde; Roland R Netz; Joachim O Rädler
Journal:  Biophys J       Date:  2016-02-02       Impact factor: 4.033

2.  Shear-induced dynamics of polymeric globules at adsorbing homogeneous and inhomogeneous surfaces.

Authors:  Matthias Radtke; M Radtke; R Netz
Journal:  Eur Phys J E Soft Matter       Date:  2014-03-31       Impact factor: 1.890

3.  FRET Measurement of Polymer Response under Shear.

Authors:  Ryo Iwao; Hiroki Yamaguchi; Makoto Obata; Yu Matsuda
Journal:  Sensors (Basel)       Date:  2021-12-01       Impact factor: 3.576

4.  Dynamical and Structural Properties of Comb Long-Chain Branched Polymer in Shear Flow.

Authors:  Deyin Wang; Xiaohui Wen; Dong Zhang; Jiajun Tang
Journal:  Int J Mol Sci       Date:  2022-09-25       Impact factor: 6.208

  4 in total

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