Literature DB >> 19776061

DNA from a 100-year-old holotype confirms the validity of a potentially extinct hummingbird species.

Jeremy J Kirchman1, Christopher C Witt, Jimmy A McGuire, Gary R Graves.   

Abstract

We used mtDNA sequence data to confirm that the controversial 100-year-old holotype of the Bogotá sunangel (Heliangelus zusii) represents a valid species. We demonstrate that H. zusii is genetically well differentiated from taxa previously hypothesized to have given rise to the specimen via hybridization. Phylogenetic analyses place H. zusii as sister to a clade of mid- to high-elevation Andean species currently placed in the genera Taphrolesbia and Aglaiocercus. Heliangelus zusii, presumed extinct, has never been observed in nature by biologists. We infer that the species occupied a restricted distribution between the upper tropical and temperate zones of the northern Andes and that it was most probably driven to extinction by deforestation that accompanied human population growth during the nineteenth and early twentieth centuries. We demonstrate the feasibility of obtaining DNA from nearly microscopic tissue samples from old hummingbird specimens and suggest that these methods could be used to resolve the taxonomy of dozens of avian taxa known only from type specimens.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19776061      PMCID: PMC2817245          DOI: 10.1098/rsbl.2009.0545

Source DB:  PubMed          Journal:  Biol Lett        ISSN: 1744-9561            Impact factor:   3.703


  4 in total

1.  MRBAYES: Bayesian inference of phylogenetic trees.

Authors:  J P Huelsenbeck; F Ronquist
Journal:  Bioinformatics       Date:  2001-08       Impact factor: 6.937

2.  A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood.

Authors:  Stéphane Guindon; Olivier Gascuel
Journal:  Syst Biol       Date:  2003-10       Impact factor: 15.683

3.  Phylogenetic systematics and biogeography of hummingbirds: Bayesian and maximum likelihood analyses of partitioned data and selection of an appropriate partitioning strategy.

Authors:  Jimmy A McGuire; Christopher C Witt; Douglas L Altshuler; J V Remsen
Journal:  Syst Biol       Date:  2007-10       Impact factor: 15.683

4.  DNA extraction from Pleistocene bones by a silica-based purification method.

Authors:  M Höss; S Pääbo
Journal:  Nucleic Acids Res       Date:  1993-08-11       Impact factor: 16.971

  4 in total
  3 in total

1.  Singing from the grave: DNA from a 180 year old type specimen confirms the identity of Chrysoperla carnea (Stephens).

Authors:  Ben W Price; Charles S Henry; Andie C Hall; Atsushi Mochizuki; Peter Duelli; Stephen J Brooks
Journal:  PLoS One       Date:  2015-04-08       Impact factor: 3.240

2.  Reexamination of Rhopalosiphum (Hemiptera: Aphididae) using linear discriminant analysis to determine the validity of synonymized species, with some new synonymies and distribution data.

Authors:  Michael Skvarla; Matthew Kramer; Christopher L Owen; Gary L Miller
Journal:  Biodivers Data J       Date:  2020-01-27

3.  Assessing DNA Barcodes for Species Identification in North American Reptiles and Amphibians in Natural History Collections.

Authors:  E Anne Chambers; Paul D N Hebert
Journal:  PLoS One       Date:  2016-04-26       Impact factor: 3.240

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.