Literature DB >> 19771338

The folding, stability and conformational dynamics of beta-barrel fluorescent proteins.

Shang-Te Danny Hsu1, Georg Blaser, Sophie E Jackson.   

Abstract

This critical review describes our current knowledge on the folding, stability and conformational dynamics of fluorescent proteins (FPs). The biophysical studies that have led to the elucidation of many of the key features of the complex energy landscape for folding for GFP and its variants are discussed. These illustrate some important issues surrounding how the large beta-barrel structure forms, and will be of interest to the protein folding community. In addition, the review highlights the importance of some of these results for the use of FPs in in vivo applications. The results should facilitate and aid in experimental designs of in vivo applications, as well as the interpretation of in vivo experimental data. The review is therefore of interest to all those working with FPs in vivo (103 references).

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Year:  2009        PMID: 19771338     DOI: 10.1039/b908170b

Source DB:  PubMed          Journal:  Chem Soc Rev        ISSN: 0306-0012            Impact factor:   54.564


  26 in total

1.  Knot formation in newly translated proteins is spontaneous and accelerated by chaperonins.

Authors:  Anna L Mallam; Sophie E Jackson
Journal:  Nat Chem Biol       Date:  2011-12-18       Impact factor: 15.040

2.  Kinetic analysis of ribosome-bound fluorescent proteins reveals an early, stable, cotranslational folding intermediate.

Authors:  Devaki A Kelkar; Amardeep Khushoo; Zhongying Yang; William R Skach
Journal:  J Biol Chem       Date:  2011-11-28       Impact factor: 5.157

3.  GFP tagging sheds light on protein translocation: implications for key methods in cell biology.

Authors:  Marcel Deponte
Journal:  Cell Mol Life Sci       Date:  2012-02-16       Impact factor: 9.261

4.  Denaturant-dependent folding of GFP.

Authors:  Govardhan Reddy; Zhenxing Liu; D Thirumalai
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-09       Impact factor: 11.205

5.  The folding competence of HIV-1 Tat mediated by interaction with TAR RNA.

Authors:  Jung Min Kim; Hee Sun Choi; Baik Lin Seong
Journal:  RNA Biol       Date:  2017-04-18       Impact factor: 4.652

6.  A desolvation model for trifluoroethanol-induced aggregation of enhanced green fluorescent protein.

Authors:  Valerie L Anderson; Watt W Webb
Journal:  Biophys J       Date:  2012-02-21       Impact factor: 4.033

7.  Hysteresis as a Marker for Complex, Overlapping Landscapes in Proteins.

Authors:  Benjamin T Andrews; Dominique T Capraro; Joanna I Sulkowska; José N Onuchic; Patricia A Jennings
Journal:  J Phys Chem Lett       Date:  2012-12-18       Impact factor: 6.475

8.  The Structure of a Thermophilic Kinase Shapes Fitness upon Random Circular Permutation.

Authors:  Alicia M Jones; Manan M Mehta; Emily E Thomas; Joshua T Atkinson; Thomas H Segall-Shapiro; Shirley Liu; Jonathan J Silberg
Journal:  ACS Synth Biol       Date:  2016-03-25       Impact factor: 5.110

Review 9.  Beta-barrel scaffold of fluorescent proteins: folding, stability and role in chromophore formation.

Authors:  Olesya V Stepanenko; Olga V Stepanenko; Irina M Kuznetsova; Vladislav V Verkhusha; Konstantin K Turoverov
Journal:  Int Rev Cell Mol Biol       Date:  2013       Impact factor: 6.813

10.  A tunable, modular approach to fluorescent protease-activated reporters.

Authors:  Peng Wu; Samantha B Nicholls; Jeanne A Hardy
Journal:  Biophys J       Date:  2013-04-02       Impact factor: 4.033

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