Literature DB >> 19770900

Three-dimensional bioluminescence tomography based on Bayesian approach.

Jinchao Feng1, Kebin Jia, Chenghu Qin, Guorui Yan, Shouping Zhu, Xing Zhang, Junting Liu, Jie Tian.   

Abstract

Bioluminescence tomography (BLT) poses a typical ill-posed inverse problem with a large number of unknowns and a relatively limited number of boundary measurements. It is indispensable to incorporate a priori information into the inverse problem formulation in order to obtain viable solutions. In the paper, Bayesian approach has been firstly suggested to incorporate multiple types of a priori information for BLT reconstruction. Meanwhile, a generalized adaptive Gaussian Markov random field (GAGMRF) prior model for unknown source density estimation is developed to further reduce the ill-posedness of BLT on the basis of finite element analysis. Then the distribution of bioluminescent source can be acquired by maximizing the log posterior probability with respect to a noise parameter and the unknown source density. Furthermore, the use of finite element method makes the algorithm appropriate for complex heterogeneous phantom. The algorithm was validated by numerical simulation of a 3-D micro-CT mouse atlas and physical phantom experiment. The reconstructed results suggest that we are able to achieve high computational efficiency and accurate localization of bioluminescent source.

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Year:  2009        PMID: 19770900     DOI: 10.1364/OE.17.016834

Source DB:  PubMed          Journal:  Opt Express        ISSN: 1094-4087            Impact factor:   3.894


  7 in total

1.  Multi-modal molecular diffuse optical tomography system for small animal imaging.

Authors:  James A Guggenheim; Hector R A Basevi; Jon Frampton; Iain B Styles; Hamid Dehghani
Journal:  Meas Sci Technol       Date:  2013       Impact factor: 2.046

2.  Comparative studies of l(p)-regularization-based reconstruction algorithms for bioluminescence tomography.

Authors:  Qitan Zhang; Xueli Chen; Xiaochao Qu; Jimin Liang; Jie Tian
Journal:  Biomed Opt Express       Date:  2012-10-23       Impact factor: 3.732

3.  In vivo quantitative bioluminescence tomography using heterogeneous and homogeneous mouse models.

Authors:  Junting Liu; Yabin Wang; Xiaochao Qu; Xiangsi Li; Xiaopeng Ma; Runqiang Han; Zhenhua Hu; Xueli Chen; Dongdong Sun; Rongqing Zhang; Duofang Chen; Dan Chen; Xiaoyuan Chen; Jimin Liang; Feng Cao; Jie Tian
Journal:  Opt Express       Date:  2010-06-07       Impact factor: 3.894

4.  Cone Beam X-ray Luminescence Computed Tomography Based on Bayesian Method.

Authors:  Guanglei Zhang; Fei Liu; Jie Liu; Jianwen Luo; Yaoqin Xie; Jing Bai; Lei Xing
Journal:  IEEE Trans Med Imaging       Date:  2016-08-26       Impact factor: 10.048

5.  Improved reconstruction quality of bioluminescent images by combining SP(3) equations and Bregman iteration method.

Authors:  Qiang Wu; Jinchao Feng; Kebin Jia; Xiangyu Wang
Journal:  Comput Math Methods Med       Date:  2013-01-22       Impact factor: 2.238

Review 6.  Development of new technologies for stem cell research.

Authors:  Xibo Ma; Qian Zhang; Xin Yang; Jie Tian
Journal:  J Biomed Biotechnol       Date:  2012-11-26

7.  Sparse reconstruction for bioluminescence tomography based on the semigreedy method.

Authors:  Wei Guo; Kebin Jia; Qian Zhang; Xueyan Liu; Jinchao Feng; Chenghu Qin; Xibo Ma; Xin Yang; Jie Tian
Journal:  Comput Math Methods Med       Date:  2012-08-14       Impact factor: 2.238

  7 in total

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