Literature DB >> 19767466

Novel GH10 xylanase, with a fibronectin type 3 domain, from Cellulosimicrobium sp. strain HY-13, a bacterium in the gut of Eisenia fetida.

Do Young Kim1, Mi Kyoung Han, Doo-Sang Park, Jong Suk Lee, Hyun-Woo Oh, Dong-Ha Shin, Tae-Sook Jeong, Sung Uk Kim, Kyung Sook Bae, Kwang-Hee Son, Ho-Yong Park.   

Abstract

The gene encoding a novel modular xylanase from Cellulosimicrobium sp. strain HY-13 was identified and expressed in Escherichia coli, and its truncated gene product was characterized. The enzyme consisted of three distinct functional domains, an N-terminal catalytic GH10 domain, a fibronectin type 3 domain, and C-terminal carbohydrate-binding module 2.

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Year:  2009        PMID： 19767466      PMCID： PMC2786537          DOI： 10.1128/AEM.01075-09

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  14 in total

1.  Mapping glycoside hydrolase substrate subsites by isothermal titration calorimetry.

Authors:  Gennady Zolotnitsky; Uri Cogan; Noam Adir; Vered Solomon; Gil Shoham; Yuval Shoham
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-26       Impact factor: 11.205

Review 2.  Xylanases, xylanase families and extremophilic xylanases.

Authors:  Tony Collins; Charles Gerday; Georges Feller
Journal:  FEMS Microbiol Rev       Date:  2005-01       Impact factor: 16.408

3.  Cloning, expression, and characterization of a new xylanase with broad temperature adaptability from Streptomyces sp. S9.

Authors:  Ning Li; Kun Meng; Yaru Wang; Pengjun Shi; Huiying Luo; Yingguo Bai; Peilong Yang; Bin Yao
Journal:  Appl Microbiol Biotechnol       Date:  2008-06-03       Impact factor: 4.813

4.  A modular xylanase containing a novel non-catalytic xylan-specific binding domain.

Authors:  G W Black; G P Hazlewood; S J Millward-Sadler; J I Laurie; H J Gilbert
Journal:  Biochem J       Date:  1995-04-01       Impact factor: 3.857

5.  Characterization of active-site aromatic residues in xylanase A from Streptomyces lividans.

Authors:  M Roberge; F Shareck; R Morosoli; D Kluepfel; C Dupont
Journal:  Protein Eng       Date:  1999-03

6.  Molecular and biochemical characterization of two xylanase-encoding genes from Cellulomonas pachnodae.

Authors:  A E Cazemier; J C Verdoes; A J van Ooyen; H J Op den Camp
Journal:  Appl Environ Microbiol       Date:  1999-09       Impact factor: 4.792

7.  The processing of high-molecular-weight xylanase (XynE, 110 kDa) from Aeromonas caviae ME-1 to 60-kDa xylanase (XynE60) in Escherichia coli and purification and characterization of XynE60.

Authors:  Chen Jian Liu; Tohru Suzuki; Satoru Hirata; Keiichi Kawai
Journal:  J Biosci Bioeng       Date:  2003       Impact factor: 2.894

8.  Biochemical characterization and sequence analysis of a xylanase produced by an exo-symbiotic bacterium of Gryllotalpa orientalis, Cellulosimicrobium sp. HY-12.

Authors:  Hyun-Woo Oh; Sun-Yeon Heo; Do Young Kim; Doo-Sang Park; Kyung Sook Bae; Ho-Yong Park
Journal:  Antonie Van Leeuwenhoek       Date:  2007-11-20       Impact factor: 2.271

9.  Unusual microbial xylanases from insect guts.

Authors:  YaLi Brennan; Walter N Callen; Leif Christoffersen; Paul Dupree; Florence Goubet; Shaun Healey; Myrian Hernández; Martin Keller; Ke Li; Nisha Palackal; Ana Sittenfeld; Giselle Tamayo; Steve Wells; Geoffrey P Hazlewood; Eric J Mathur; Jay M Short; Dan E Robertson; Brian A Steer
Journal:  Appl Environ Microbiol       Date:  2004-06       Impact factor: 4.792

10.  Purification and properties of a xylanase from Cellvibrio gilvus that hydrolyzes p-nitrophenyl cellooligosaccharides.

Authors:  K Haga; M Kitaoka; Y Kashiwagi; T Sasaki; H Taniguchi
Journal:  Agric Biol Chem       Date:  1991-08
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  10 in total

1.  Microbiome of fungus-growing termites: a new reservoir for lignocellulase genes.

Authors:  Ning Liu; Xing Yan; Meiling Zhang; Lei Xie; Qian Wang; Yongping Huang; Xuguo Zhou; Shengyue Wang; Zhihua Zhou
Journal:  Appl Environ Microbiol       Date:  2010-11-05       Impact factor: 4.792

2.  Biocatalytic properties and substrate-binding ability of a modular GH10 β-1,4-xylanase from an insect-symbiotic bacterium, Streptomyces mexicanus HY-14.

Authors:  Do Young Kim; Dong-Ha Shin; Sora Jung; Jong Suk Lee; Han-Young Cho; Kyung Sook Bae; Chang-Keun Sung; Young Ha Rhee; Kwang-Hee Son; Ho-Yong Park
Journal:  J Microbiol       Date:  2014-10-01       Impact factor: 3.422

3.  Degradation of Granular Starch by the Bacterium Microbacterium aurum Strain B8.A Involves a Modular α-Amylase Enzyme System with FNIII and CBM25 Domains.

Authors:  Vincent Valk; Wieger Eeuwema; Fean D Sarian; Rachel M van der Kaaij; Lubbert Dijkhuizen
Journal:  Appl Environ Microbiol       Date:  2015-07-17       Impact factor: 4.792

4.  Aspergillus niger β-glucosidase has a cellulase-like tadpole molecular shape: insights into glycoside hydrolase family 3 (GH3) β-glucosidase structure and function.

Authors:  Marisa A Lima; Mario Oliveira-Neto; Marco Antonio S Kadowaki; Flavio R Rosseto; Erica T Prates; Fabio M Squina; Adriana F P Leme; Munir S Skaf; Igor Polikarpov
Journal:  J Biol Chem       Date:  2013-09-24       Impact factor: 5.157

5.  Cellulosimicrobium fucosivorans sp. nov., isolated from San Elijo Lagoon, contains a fucose metabolic pathway linked to carotenoid production.

Authors:  Fabiola A Aviles; John A Kyndt
Journal:  Arch Microbiol       Date:  2021-06-20       Impact factor: 2.552

6.  Molecular characterization of a cold-active recombinant xylanase from Flavobacterium johnsoniae and its applicability in xylan hydrolysis.

Authors:  Shicheng Chen; Michael G Kaufman; Kerri L Miazgowicz; Michael Bagdasarian; Edward D Walker
Journal:  Bioresour Technol       Date:  2012-10-30       Impact factor: 9.642

7.  Identification and Characterization of a Novel, Cold-Adapted d-Xylobiose- and d-Xylose-Releasing Endo-β-1,4-xylanase from an Antarctic Soil Bacterium, Duganella sp. PAMC 27433.

Authors:  Do Young Kim; Jonghoon Kim; Yung Mi Lee; Jong Suk Lee; Dong-Ha Shin; Bon-Hwan Ku; Kwang-Hee Son; Ho-Yong Park
Journal:  Biomolecules       Date:  2021-04-30

8.  Characterization of the starch-acting MaAmyB enzyme from Microbacterium aurum B8.A representing the novel subfamily GH13_42 with an unusual, multi-domain organization.

Authors:  Vincent Valk; Rachel M van der Kaaij; Lubbert Dijkhuizen
Journal:  Sci Rep       Date:  2016-11-03       Impact factor: 4.379

9.  Novel Bi-Modular GH19 Chitinase with Broad pH Stability from a Fibrolytic Intestinal Symbiont of Eisenia fetida, Cellulosimicrobium funkei HY-13.

Authors:  Lu Bai; Jonghoon Kim; Kwang-Hee Son; Chung-Wook Chung; Dong-Ha Shin; Bon-Hwan Ku; Do Young Kim; Ho-Yong Park
Journal:  Biomolecules       Date:  2021-11-21

10.  Novel, acidic, and cold-adapted glycoside hydrolase family 8 endo-β-1,4-glucanase from an Antarctic lichen-associated bacterium, Lichenicola cladoniae PAMC 26568.

Authors:  Do Young Kim; Jonghoon Kim; Yung Mi Lee; Soo Min Byeon; Jeong Hae Gwak; Jong Suk Lee; Dong-Ha Shin; Ho-Yong Park
Journal:  Front Microbiol       Date:  2022-07-14       Impact factor: 6.064
  10 in total

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