Literature DB >> 19767424

Tryptophan inhibits Proteus vulgaris TnaC leader peptide elongation, activating tna operon expression.

Luis R Cruz-Vera1, Rui Yang, Charles Yanofsky.   

Abstract

Expression of the tna operon of Escherichia coli and of Proteus vulgaris is induced by L-tryptophan. In E. coli, tryptophan action is dependent on the presence of several critical residues (underlined) in the newly synthesized TnaC leader peptide, WFNIDXXL/IXXXXP. These residues are conserved in TnaC of P. vulgaris and of other bacterial species. TnaC of P. vulgaris has one additional feature, distinguishing it from TnaC of E. coli; it contains two C-terminal lysine residues following the conserved proline residue. In the present study, we investigated L-tryptophan induction of the P. vulgaris tna operon, transferred on a plasmid into E. coli. Induction was shown to be L-tryptophan dependent; however, the range of induction was less than that observed for the E. coli tna operon. We compared the genetic organization of both operons and predicted similar folding patterns for their respective leader mRNA segments. However, additional analyses revealed that L-tryptophan action in the P. vulgaris tna operon involves inhibition of TnaC elongation, following addition of proline, rather than inhibition of leader peptide termination. Our findings also establish that the conserved residues in TnaC of P. vulgaris are essential for L-tryptophan induction, and for inhibition of peptide elongation. TnaC synthesis is thus an excellent model system for studies of regulation of both peptide termination and peptide elongation, and for studies of ribosome recognition of the features of a nascent peptide.

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Year:  2009        PMID: 19767424      PMCID: PMC2772470          DOI: 10.1128/JB.01002-09

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  20 in total

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Authors:  M Sofia Ciampi
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2.  Ribosomal features essential for tna operon induction: tryptophan binding at the peptidyl transferase center.

Authors:  Luis R Cruz-Vera; Aaron New; Catherine Squires; Charles Yanofsky
Journal:  J Bacteriol       Date:  2007-02-09       Impact factor: 3.490

3.  Evidence for transcription antitermination control of tryptophanase operon expression in Escherichia coli K-12.

Authors:  V Stewart; C Yanofsky
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4.  Changes produced by bound tryptophan in the ribosome peptidyl transferase center in response to TnaC, a nascent leader peptide.

Authors:  Luis Rogelio Cruz-Vera; Ming Gong; Charles Yanofsky
Journal:  Proc Natl Acad Sci U S A       Date:  2006-02-27       Impact factor: 11.205

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Journal:  J Mol Biol       Date:  1996-08-02       Impact factor: 5.469

6.  Features of ribosome-peptidyl-tRNA interactions essential for tryptophan induction of tna operon expression.

Authors:  Luis Rogelio Cruz-Vera; Soumitra Rajagopal; Catherine Squires; Charles Yanofsky
Journal:  Mol Cell       Date:  2005-08-05       Impact factor: 17.970

7.  Characterization of the tryptophanase operon of Proteus vulgaris. Cloning, nucleotide sequence, amino acid homology, and in vitro synthesis of the leader peptide and regulatory analysis.

Authors:  A V Kamath; C Yanofsky
Journal:  J Biol Chem       Date:  1992-10-05       Impact factor: 5.157

8.  Transcription initiation at the tryptophanase promoter of Escherichia coli K-12.

Authors:  M C Deeley; C Yanofsky
Journal:  J Bacteriol       Date:  1982-08       Impact factor: 3.490

9.  The plasticity of a translation arrest motif yields insights into nascent polypeptide recognition inside the ribosome tunnel.

Authors:  Mee-Ngan Yap; Harris D Bernstein
Journal:  Mol Cell       Date:  2009-04-24       Impact factor: 17.970

10.  Conserved residues Asp16 and Pro24 of TnaC-tRNAPro participate in tryptophan induction of Tna operon expression.

Authors:  Luis R Cruz-Vera; Charles Yanofsky
Journal:  J Bacteriol       Date:  2008-04-18       Impact factor: 3.490

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Journal:  Biochem Biophys Res Commun       Date:  2010-02-01       Impact factor: 3.575

2.  Picky nascent peptides do not talk to foreign ribosomes.

Authors:  Nora Vázquez-Laslop; Alexander S Mankin
Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-04       Impact factor: 11.205

3.  An adaptor from translational to transcriptional control enables predictable assembly of complex regulation.

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4.  Recognition of the regulatory nascent chain TnaC by the ribosome.

Authors:  Leonardo G Trabuco; Christopher B Harrison; Eduard Schreiner; Klaus Schulten
Journal:  Structure       Date:  2010-05-12       Impact factor: 5.006

5.  Two groups of phenylalanine biosynthetic operon leader peptides genes: a high level of apparently incidental frameshifting in decoding Escherichia coli pheL.

Authors:  Olga L Gurvich; S Joakim Näsvall; Pavel V Baranov; Glenn R Björk; John F Atkins
Journal:  Nucleic Acids Res       Date:  2010-12-21       Impact factor: 16.971

6.  Isolation of translating ribosomes containing peptidyl-tRNAs for functional and structural analyses.

Authors:  Nitin Shirole; Sreeram Balasubramanian; Charles Yanofsky; Luis Cruz-Vera
Journal:  J Vis Exp       Date:  2011-02-25       Impact factor: 1.355

7.  Interactions of the TnaC nascent peptide with rRNA in the exit tunnel enable the ribosome to respond to free tryptophan.

Authors:  Allyson K Martínez; Emily Gordon; Arnab Sengupta; Nitin Shirole; Dorota Klepacki; Blanca Martinez-Garriga; Lewis M Brown; Michael J Benedik; Charles Yanofsky; Alexander S Mankin; Nora Vazquez-Laslop; Matthew S Sachs; Luis R Cruz-Vera
Journal:  Nucleic Acids Res       Date:  2013-10-16       Impact factor: 16.971

  7 in total

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