Literature DB >> 19763879

Isolation, nucleotide identification and tissue expression of three novel ovine genes-SLC25A4, SLC25A5 and SLC25A6.

Liangyu Yang1, Yiduo He, Qingbo Kong, Wencai Zhang, Dongmei Xi, Huaming Mao, Weidong Deng.   

Abstract

The complete coding sequences of three of sheep genes SLC25A4, SLC25A5 and SLC25A6 were firstly amplified using the reverse transcriptase polymerase chain reaction (RT-PCR) according to the conserved sequence information of the cattle or other mammals and known highly homologous sheep ESTs. Sheep SLC25A4, SLC25A5 and SLC25A6 genes encode three corresponding proteins of 298 amino acids which contain the identically conserved putative mitochondrial carrier protein domain. Sheep SLC25A4 protein has high homology with the SLC25A4 proteins of six species-cattle (99%), human (95%), rat (95%), mouse (94%), dog (94%) and chicken (89%). Sheep SLC25A5 protein has high identity with the SLC25A5 proteins of five species-cattle (100%), dog (99%), mouse (98%), rat (98%) and human (98%). Sheep SLC25A6 protein also has high homology with the SLC25A6 proteins of four species-cattle (99%), human (97%), pig (97%) and chicken (93%). The phylogenetic tree analysis demonstrated that sheep SLC25A4, SLC25A5 and SLC25A6 proteins share a common ancestor. Moreover, SLC25A4, SLC25A5 and SLC25A6 proteins present stronger interaction each other. The tissue expression analysis indicated that sheep SLC25A4, SLC25A5 and SLC25A6 genes were expressed in a range of tissues including leg muscle, kidney, skin, longissimus dorsi muscle, spleen, heart and liver. Our experiment is the first to provide the primary foundation for further insight into these three sheep genes.

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Year:  2009        PMID: 19763879     DOI: 10.1007/s11033-009-9812-z

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  19 in total

Review 1.  NPS@: network protein sequence analysis.

Authors:  C Combet; C Blanchet; C Geourjon; G Deléage
Journal:  Trends Biochem Sci       Date:  2000-03       Impact factor: 13.807

2.  Structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside.

Authors:  Eva Pebay-Peyroula; Cécile Dahout-Gonzalez; Richard Kahn; Véronique Trézéguet; Guy J-M Lauquin; Gérard Brandolin
Journal:  Nature       Date:  2003-11-06       Impact factor: 49.962

3.  Comparison of Northern blot hybridization and a reverse transcriptase-polymerase chain reaction technique for measurement of mRNA expression of metalloproteinases and matrix components in articular cartilage and synovial membrane from horses with osteoarthritis.

Authors:  J E Fehr; G W Trotter; J T Oxford; D A Hart
Journal:  Am J Vet Res       Date:  2000-08       Impact factor: 1.156

Review 4.  The mitochondrial transporter family (SLC25): physiological and pathological implications.

Authors:  Ferdinando Palmieri
Journal:  Pflugers Arch       Date:  2003-11-04       Impact factor: 3.657

5.  [Cloning, nucleotide sequence and tissue expression profile of three novel porcine genes--RHOB, RHOG and PRAF1].

Authors:  G Y Liu; S Z Gao; C R Ge; X Zhang
Journal:  Mol Biol (Mosk)       Date:  2008 Jan-Feb

6.  MITOCHIP assessment of differential gene expression in the skeletal muscle of Ant1 knockout mice: coordinate regulation of OXPHOS, antioxidant, and apoptotic genes.

Authors:  Vaidya Subramaniam; Pawel Golik; Deborah G Murdock; Shawn Levy; Keith W Kerstann; Pinar E Coskun; Goarik A Melkonian; Douglas C Wallace
Journal:  Biochim Biophys Acta       Date:  2008-03-28

7.  Adenine nucleotide translocase 3 (ANT3) overexpression induces apoptosis in cultured cells.

Authors:  Mònica Zamora; Meritxell Granell; Teresa Mampel; Octavi Viñas
Journal:  FEBS Lett       Date:  2004-04-09       Impact factor: 4.124

8.  Mitochondrial adenine nucleotide translocator 3 is regulated by IL-4 and IFN-gamma via STAT-dependent pathways.

Authors:  Ji-Young Jang; Choong-Eun Lee
Journal:  Cell Immunol       Date:  2003-11       Impact factor: 4.868

9.  Differential gene expression in the murine gastric fundus lacking interstitial cells of Cajal.

Authors:  Yataro Daigo; Ichiro Takayama; Bruce A J Ponder; Carlos Caldas; Sean M Ward; Kenton M Sanders; Masayuki A Fujino
Journal:  BMC Gastroenterol       Date:  2003-06-10       Impact factor: 3.067

Review 10.  Comparative genomics.

Authors:  Ross C Hardison
Journal:  PLoS Biol       Date:  2003-11-17       Impact factor: 8.029

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  3 in total

1.  Mitochondrial GWAS and association of nuclear - mitochondrial epistasis with BMI in T1DM patients.

Authors:  Agnieszka H Ludwig-Słomczyńska; Michał T Seweryn; Przemysław Kapusta; Ewelina Pitera; Samuel K Handelman; Urszula Mantaj; Katarzyna Cyganek; Paweł Gutaj; Łucja Dobrucka; Ewa Wender-Ożegowska; Maciej T Małecki; Paweł P Wołkow
Journal:  BMC Med Genomics       Date:  2020-07-07       Impact factor: 3.063

2.  Molecular cloning, sequence identification and tissue expression profile of three novel genes Sfxn1, Snai2 and Cno from Black-boned sheep (Ovis aries).

Authors:  Dongmei Xi; Yiduo He; Yongke Sun; Xiao Gou; Shuli Yang; Huaming Mao; Weidong Deng
Journal:  Mol Biol Rep       Date:  2010-09-19       Impact factor: 2.316

3.  An integrated bioinformatic investigation of mitochondrial solute carrier family 25 (SLC25) in colon cancer followed by preliminary validation of member 5 (SLC25A5) in tumorigenesis.

Authors:  Yan-Jie Chen; Wei-Feng Hong; Meng-Ling Liu; Xi Guo; Yi-Yi Yu; Yue-Hong Cui; Tian-Shu Liu; Li Liang
Journal:  Cell Death Dis       Date:  2022-03-14       Impact factor: 9.685

  3 in total

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