Literature DB >> 19762247

A single circularly permuted GFP sensor for inositol-1,3,4,5-tetrakisphosphate based on a split PH domain.

Reiko Sakaguchi1, Takashi Endoh, Seigo Yamamoto, Kazuki Tainaka, Kenji Sugimoto, Nobutaka Fujieda, Shigeki Kiyonaka, Yasuo Mori, Takashi Morii.   

Abstract

A fluorescent sensor for the detection of inositol-1,3,4,5-tetrakisphosphate, Ins(1,3,4,5)P(4), was constructed from a split PH domain and a single circularly permuted GFP. A structure-based design was conducted to transduce a ligand-induced subtle structural perturbation of the split PH domain to an alteration in the population of the protonated and the deprotonated states of the GFP chromophore. Excitation of each distinct absorption band corresponding to the protonated or the deprotonated state of GFP resulted an increase and a decrease, respectively, in the intensity of emission spectra upon addition of Ins(1,3,4,5)P(4) to the split PH domain-based sensor. The Ins(1,3,4,5)P(4) sensor retained the ligand affinity and the selectivity of the parent PH domain, and realized the ratiometric fluorescence detection of Ins(1,3,4,5)P(4).

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Year:  2009        PMID: 19762247     DOI: 10.1016/j.bmc.2009.08.015

Source DB:  PubMed          Journal:  Bioorg Med Chem        ISSN: 0968-0896            Impact factor:   3.641


  6 in total

Review 1.  In vitro platforms for evaluating liver toxicity.

Authors:  Shyam Sundhar Bale; Lawrence Vernetti; Nina Senutovitch; Rohit Jindal; Manjunath Hegde; Albert Gough; William J McCarty; Ahmet Bakan; Abhinav Bhushan; Tong Ying Shun; Inna Golberg; Richard DeBiasio; Berk Osman Usta; D Lansing Taylor; Martin L Yarmush
Journal:  Exp Biol Med (Maywood)       Date:  2014-04-24

2.  A two-step screening to optimize the signal response of an auto-fluorescent protein-based biosensor.

Authors:  Shunsuke Tajima; Eiji Nakata; Reiko Sakaguchi; Masayuki Saimura; Yasuo Mori; Takashi Morii
Journal:  RSC Adv       Date:  2022-05-20       Impact factor: 4.036

3.  Phosphoinositide and inositol phosphate analysis in lymphocyte activation.

Authors:  Karsten Sauer; Yina Hsing Huang; Hongying Lin; Mark Sandberg; Georg W Mayr
Journal:  Curr Protoc Immunol       Date:  2009-11

Review 4.  Design strategies of fluorescent biosensors based on biological macromolecular receptors.

Authors:  Kazuki Tainaka; Reiko Sakaguchi; Hironori Hayashi; Shun Nakano; Fong Fong Liew; Takashi Morii
Journal:  Sensors (Basel)       Date:  2010-02-12       Impact factor: 3.576

5.  Photoactivatable genetically encoded calcium indicators for targeted neuronal imaging.

Authors:  Shai Berlin; Elizabeth C Carroll; Zachary L Newman; Hitomi O Okada; Carson M Quinn; Benjamin Kallman; Nathan C Rockwell; Shelley S Martin; J Clark Lagarias; Ehud Y Isacoff
Journal:  Nat Methods       Date:  2015-07-13       Impact factor: 28.547

6.  Comparative Analysis of Bacteriophytochrome Agp2 and Its Engineered Photoactivatable NIR Fluorescent Proteins PAiRFP1 and PAiRFP2.

Authors:  Faez Iqbal Khan; Fakhrul Hassan; Razique Anwer; Feng Juan; Dakun Lai
Journal:  Biomolecules       Date:  2020-09-07
  6 in total

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