Literature DB >> 19758311

Detection of a rare Caucasoid HLA-DRB1*0337 in a Taiwanese bone marrow donor using sequence-based typing method.

M J Chen1, C C Chu, M H Shyr, C L Lin, P Y Lin, K L Yang.   

Abstract

We here describe the identification of HLA-DRB1*0337, using sequence-based typing (SBT) method, in a Taiwanese bone marrow donor intrigued by a casual curiosity on the donor's racial background. On high-resolution sequence-specific primer (SSP) typing we observed misleading reaction patterns due to similarity of DNA sequences in the exon 2 of DRB1*0301, *0317, *0337 and *1139. When encountering rare alleles in HLA typing, it is important to pay extra attentions to avoid pitfalls and shortcomings of SSP typing kits routinely used and bear in mind that constant up-dating of high-resolution SSP typing kits to be able to distinguish newly reported alleles. SBT may be considered as a back-up HLA typing method to confirm rare alleles.

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Year:  2009        PMID: 19758311     DOI: 10.1111/j.1744-313X.2009.00879.x

Source DB:  PubMed          Journal:  Int J Immunogenet        ISSN: 1744-3121            Impact factor:   1.466


  2 in total

1.  A novel single cDNA amplicon pyrosequencing method for high-throughput, cost-effective sequence-based HLA class I genotyping.

Authors:  Simon M Lank; Roger W Wiseman; Dawn M Dudley; David H O'Connor
Journal:  Hum Immunol       Date:  2010-07-30       Impact factor: 2.850

2.  Nomenclature for factors of the HLA system, update December 2009.

Authors:  Steven G E Marsh
Journal:  Tissue Antigens       Date:  2010-02-10
  2 in total

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