Literature DB >> 19752493

Functional recognition imaging using artificial neural networks: applications to rapid cellular identification via broadband electromechanical response.

M P Nikiforov1, V V Reukov, G L Thompson, A A Vertegel, S Guo, S V Kalinin, S Jesse.   

Abstract

Functional recognition imaging in scanning probe microscopy (SPM) using artificial neural network identification is demonstrated. This approach utilizes statistical analysis of complex SPM responses at a single spatial location to identify the target behavior, which is reminiscent of associative thinking in the human brain, obviating the need for analytical models. We demonstrate, as an example of recognition imaging, rapid identification of cellular organisms using the difference in electromechanical activity over a broad frequency range. Single-pixel identification of model Micrococcus lysodeikticus and Pseudomonas fluorescens bacteria is achieved, demonstrating the viability of the method.

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Year:  2009        PMID: 19752493      PMCID: PMC2846431          DOI: 10.1088/0957-4484/20/40/405708

Source DB:  PubMed          Journal:  Nanotechnology        ISSN: 0957-4484            Impact factor:   3.874


  13 in total

Review 1.  Some trends in microscope image processing.

Authors:  Noël Bonnet
Journal:  Micron       Date:  2004       Impact factor: 2.251

2.  Single-molecule recognition imaging microscopy.

Authors:  C Stroh; H Wang; R Bash; B Ashcroft; J Nelson; H Gruber; D Lohr; S M Lindsay; P Hinterdorfer
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-16       Impact factor: 11.205

3.  High resolution electromechanical imaging of ferroelectric materials in a liquid environment by piezoresponse force microscopy.

Authors:  Brian J Rodriguez; Stephen Jesse; A P Baddorf; Sergei V Kalinin
Journal:  Phys Rev Lett       Date:  2006-06-16       Impact factor: 9.161

4.  High-resolution imaging of proteins in human teeth by scanning probe microscopy.

Authors:  A Gruverman; D Wu; B J Rodriguez; S V Kalinin; S Habelitz
Journal:  Biochem Biophys Res Commun       Date:  2006-11-10       Impact factor: 3.575

5.  Scanning probe acceleration microscopy (SPAM) in fluids: mapping mechanical properties of surfaces at the nanoscale.

Authors:  Justin Legleiter; Matthew Park; Brian Cusick; Tomasz Kowalewski
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-21       Impact factor: 11.205

6.  Principal component and spatial correlation analysis of spectroscopic-imaging data in scanning probe microscopy.

Authors:  Stephen Jesse; Sergei V Kalinin
Journal:  Nanotechnology       Date:  2009-02-03       Impact factor: 3.874

7.  An atomic force microscope tip designed to measure time-varying nanomechanical forces.

Authors:  Ozgur Sahin; Sergei Magonov; Chanmin Su; Calvin F Quate; Olav Solgaard
Journal:  Nat Nanotechnol       Date:  2007-07-29       Impact factor: 39.213

8.  How the doors to the nanoworld were opened.

Authors:  Christoph Gerber; Hans Peter Lang
Journal:  Nat Nanotechnol       Date:  2006-10       Impact factor: 39.213

9.  Towards local electromechanical probing of cellular and biomolecular systems in a liquid environment.

Authors:  Sergei V Kalinin; Brian J Rodriguez; Stephen Jesse; Katyayani Seal; Roger Proksch; Sophia Hohlbauch; Irene Revenko; Gary Lee Thompson; Alexey A Vertegel
Journal:  Nanotechnology       Date:  2007-09-19       Impact factor: 3.874

10.  Nanomechanical analysis of cells from cancer patients.

Authors:  Sarah E Cross; Yu-Sheng Jin; Jianyu Rao; James K Gimzewski
Journal:  Nat Nanotechnol       Date:  2007-12-02       Impact factor: 39.213

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  5 in total

1.  Electromechanical and elastic probing of bacteria in a cell culture medium.

Authors:  G L Thompson; V V Reukov; M P Nikiforov; S Jesse; S V Kalinin; A A Vertegel
Journal:  Nanotechnology       Date:  2012-05-28       Impact factor: 3.874

2.  Materials Science in the AI age: high-throughput library generation, machine learning and a pathway from correlations to the underpinning physics.

Authors:  Rama K Vasudevan; Kamal Choudhary; Apurva Mehta; Ryan Smith; Gilad Kusne; Francesca Tavazza; Lukas Vlcek; Maxim Ziatdinov; Sergei V Kalinin; Jason Hattrick-Simpers
Journal:  MRS Commun       Date:  2019       Impact factor: 2.566

3.  Improving image contrast and material discrimination with nonlinear response in bimodal atomic force microscopy.

Authors:  Daniel Forchheimer; Robert Forchheimer; David B Haviland
Journal:  Nat Commun       Date:  2015-02-10       Impact factor: 14.919

4.  Neural Network for Nanoscience Scanning Electron Microscope Image Recognition.

Authors:  Mohammad Hadi Modarres; Rossella Aversa; Stefano Cozzini; Regina Ciancio; Angelo Leto; Giuseppe Piero Brandino
Journal:  Sci Rep       Date:  2017-10-16       Impact factor: 4.379

Review 5.  Big data and deep data in scanning and electron microscopies: deriving functionality from multidimensional data sets.

Authors:  Alex Belianinov; Rama Vasudevan; Evgheni Strelcov; Chad Steed; Sang Mo Yang; Alexander Tselev; Stephen Jesse; Michael Biegalski; Galen Shipman; Christopher Symons; Albina Borisevich; Rick Archibald; Sergei Kalinin
Journal:  Adv Struct Chem Imaging       Date:  2015-05-13
  5 in total

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