Literature DB >> 19751676

Structural changes to monomeric CuZn superoxide dismutase caused by the familial amyotrophic lateral sclerosis-associated mutation A4V.

Tom Schmidlin1, Brian K Kennedy, Valerie Daggett.   

Abstract

Amyotrophic lateral sclerosis (ALS) is a progressive motor neuron degenerative disease, and the inherited form, familial ALS (fALS), has been linked to over 100 different point mutations scattered throughout the Cu-Zn superoxide dismutase protein (SOD1). The disease is likely due to a toxic gain of function caused by the misfolding, oligomerization, and eventual aggregation of mutant SOD1, but it is not yet understood how the structurally diverse mutations result in a common disease phenotype. The behavior of the apo-monomer fALS-associated mutant protein A4V was explored using molecular-dynamics simulations to elucidate characteristic structural changes to the protein that may allow the mutant form to improperly associate with other monomer subunits. Simulations showed that the mutant protein is less stable than the WT protein overall, with shifts in residue-residue contacts that lead to destabilization of the dimer and metal-binding sites, and stabilization of nonnative contacts that leads to a misfolded state. These findings provide a unifying explanation for disparate experimental observations, allow a better understanding of alterations of residue contacts that accompany loss of SOD1 structural integrity, and suggest sites where compensatory changes may stabilize the mutant structure.

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Year:  2009        PMID: 19751676      PMCID: PMC2749781          DOI: 10.1016/j.bpj.2009.06.043

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  50 in total

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2.  Characterization of a possible amyloidogenic precursor in glutamine-repeat neurodegenerative diseases.

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Journal:  Proteins       Date:  2005-11-15

4.  Cutoff size need not strongly influence molecular dynamics results for solvated polypeptides.

Authors:  David A C Beck; Roger S Armen; Valerie Daggett
Journal:  Biochemistry       Date:  2005-01-18       Impact factor: 3.162

5.  Dimer asymmetry in superoxide dismutase studied by molecular dynamics simulation.

Authors:  M Falconi; R Gallimbeni; E Paci
Journal:  J Comput Aided Mol Des       Date:  1996-10       Impact factor: 3.686

Review 6.  Copper-zinc superoxide dismutase and amyotrophic lateral sclerosis.

Authors:  Joan Selverstone Valentine; Peter A Doucette; Soshanna Zittin Potter
Journal:  Annu Rev Biochem       Date:  2005       Impact factor: 23.643

7.  Destabilization of apoprotein is insufficient to explain Cu,Zn-superoxide dismutase-linked ALS pathogenesis.

Authors:  Jorge A Rodriguez; Bryan Francis Shaw; Armando Durazo; Se Hui Sohn; Peter A Doucette; Aram M Nersissian; Kym F Faull; Daryl K Eggers; Ashutosh Tiwari; Lawrence J Hayward; Joan Selverstone Valentine
Journal:  Proc Natl Acad Sci U S A       Date:  2005-07-14       Impact factor: 11.205

8.  Dissociation of human copper-zinc superoxide dismutase dimers using chaotrope and reductant. Insights into the molecular basis for dimer stability.

Authors:  Peter A Doucette; Lisa J Whitson; Xiaohang Cao; Virgil Schirf; Borries Demeler; Joan Selverstone Valentine; Jeffrey C Hansen; P John Hart
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9.  Variable clinical symptoms in familial amyotrophic lateral sclerosis with a novel point mutation in the Cu/Zn superoxide dismutase gene.

Authors:  M Ikeda; K Abe; M Aoki; M Sahara; M Watanabe; M Shoji; P H St George-Hyslop; S Hirai; Y Itoyama
Journal:  Neurology       Date:  1995-11       Impact factor: 9.910

10.  Aggregation and motor neuron toxicity of an ALS-linked SOD1 mutant independent from wild-type SOD1.

Authors:  L I Bruijn; M K Houseweart; S Kato; K L Anderson; S D Anderson; E Ohama; A G Reaume; R W Scott; D W Cleveland
Journal:  Science       Date:  1998-09-18       Impact factor: 47.728

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  30 in total

1.  A revisited folding reporter for quantitative assay of protein misfolding and aggregation in mammalian cells.

Authors:  Simpson Gregoire; Inchan Kwon
Journal:  Biotechnol J       Date:  2012-06-27       Impact factor: 4.677

2.  Destabilization of the dimer interface is a common consequence of diverse ALS-associated mutations in metal free SOD1.

Authors:  Helen R Broom; Jessica A O Rumfeldt; Kenrick A Vassall; Elizabeth M Meiering
Journal:  Protein Sci       Date:  2015-10-05       Impact factor: 6.725

3.  Strategies for stabilizing superoxide dismutase (SOD1), the protein destabilized in the most common form of familial amyotrophic lateral sclerosis.

Authors:  Jared R Auclair; Kristin J Boggio; Gregory A Petsko; Dagmar Ringe; Jeffrey N Agar
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-22       Impact factor: 11.205

4.  DIVE: a data intensive visualization engine.

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5.  A misfolded dimer of Cu/Zn-superoxide dismutase leading to pathological oligomerization in amyotrophic lateral sclerosis.

Authors:  Itsuki Anzai; Eiichi Tokuda; Atsushi Mukaiyama; Shuji Akiyama; Fumito Endo; Koji Yamanaka; Hidemi Misawa; Yoshiaki Furukawa
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6.  Glutathionylation at Cys-111 induces dissociation of wild type and FALS mutant SOD1 dimers.

Authors:  Rachel L Redler; Kyle C Wilcox; Elizabeth A Proctor; Lanette Fee; Michael Caplow; Nikolay V Dokholyan
Journal:  Biochemistry       Date:  2011-07-18       Impact factor: 3.162

7.  Cis-suppression to arrest protein aggregation in mammalian cells.

Authors:  Simpson Gregoire; Shaojie Zhang; Joseph Costanzo; Kelly Wilson; Erik J Fernandez; Inchan Kwon
Journal:  Biotechnol Bioeng       Date:  2013-10-18       Impact factor: 4.530

8.  Structural and dynamic properties of the human prion protein.

Authors:  Wei Chen; Marc W van der Kamp; Valerie Daggett
Journal:  Biophys J       Date:  2014-03-04       Impact factor: 4.033

9.  Shared unfolding pathways of unrelated immunoglobulin-like β-sandwich proteins.

Authors:  Rudesh D Toofanny; Sara Calhoun; Amanda L Jonsson; Valerie Daggett
Journal:  Protein Eng Des Sel       Date:  2019-12-31       Impact factor: 1.650

10.  Structural consequences of mutations to the α-tocopherol transfer protein associated with the neurodegenerative disease ataxia with vitamin E deficiency.

Authors:  Dennis Bromley; Peter C Anderson; Valerie Daggett
Journal:  Biochemistry       Date:  2013-06-10       Impact factor: 3.162

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