Literature DB >> 19747486

Modeling of the genetic switch of bacteriophage TP901-1: A heteromer of CI and MOR ensures robust bistability.

Hiizu Nakanishi1, Margit Pedersen, Anne K Alsing, Kim Sneppen.   

Abstract

The lytic-lysogenic switch of the temperate lactococcal phage TP901-1 is fundamentally different from that of phage lambda. In phage TP901-1, the lytic promoter P(L) is repressed by CI, whereas repression of the lysogenic promoter P(R) requires the presence of both of the antagonistic regulator proteins, MOR and CI. We model the central part of the switch and compare the two cases for P(R) repression: the one where the two regulators interact only on the DNA and the other where the two regulators form a heteromer complex in the cytoplasm prior to DNA binding. The models are analyzed for bistability, and the predicted promoter repression folds are compared to experimental data. We conclude that the experimental data are best reproduced the latter case, where a heteromer complex forms in solution. We further find that CI sequestration by the formation of MOR:CI complexes in cytoplasm makes the genetic switch robust.

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Year:  2009        PMID: 19747486     DOI: 10.1016/j.jmb.2009.08.075

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  5 in total

1.  Predicting gene-regulation functions: lessons from temperate bacteriophages.

Authors:  Vladimir B Teif
Journal:  Biophys J       Date:  2010-04-07       Impact factor: 4.033

2.  Key players in the genetic switch of bacteriophage TP901-1.

Authors:  Anne Alsing; Margit Pedersen; Kim Sneppen; Karin Hammer
Journal:  Biophys J       Date:  2011-01-19       Impact factor: 4.033

3.  Characterization of the CI repressor protein encoded by the temperate lactococcal phage TP901-1.

Authors:  Margit Pedersen; Malgorzata Ligowska; Karin Hammer
Journal:  J Bacteriol       Date:  2010-01-29       Impact factor: 3.490

4.  Conditional cooperativity of toxin - antitoxin regulation can mediate bistability between growth and dormancy.

Authors:  Ilaria Cataudella; Kim Sneppen; Kenn Gerdes; Namiko Mitarai
Journal:  PLoS Comput Biol       Date:  2013-08-29       Impact factor: 4.475

5.  Repression of the lysogenic PR promoter in bacteriophage TP901-1 through binding of a CI-MOR complex to a composite OM-OR operator.

Authors:  Margit Pedersen; Jesper Tvenge Neergaard; Johan Cassias; Kim Krighaar Rasmussen; Leila Lo Leggio; Kim Sneppen; Karin Hammer; Mogens Kilstrup
Journal:  Sci Rep       Date:  2020-05-26       Impact factor: 4.379

  5 in total

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