Literature DB >> 19746966

Arginine, a key residue for the enhancing ability of an antifreeze protein of the beetle Dendroides canadensis.

Sen Wang1, Natapol Amornwittawat, Vonny Juwita, Yu Kao, John G Duman, Tod A Pascal, William A Goddard, Xin Wen.   

Abstract

Antifreeze proteins (AFPs) can produce a difference between the nonequilibrium freezing point and the melting point, termed thermal hysteresis (TH). The TH activity of an antifreeze protein (AFP) depends on the specific AFP and its concentration as well as the presence of cosolutes including low molecular mass solutes and/or proteins. We recently identified series of carboxylates and polyols as efficient enhancers for an AFP from the beetle Dendroides canadensis. In this study, we chemically modified DAFP-1 using the arginine-specific reagent 1,2-cyclohexanedione. We demonstrated that 1,2-cyclohexanedione specifically modifies one arginine residue and the modified DAFP-1 loses its enhancing ability completely or partially in the presence of previously identified enhancers. The stronger the enhancement ability of the enhancer on the native DAFP-1, the stronger the enhancement effect of the enhancer on the modified DAFP-1. The weaker enhancers (e.g., glycerol) completely lose their enhancement effect on the modified DAFP-1 due to their inability to compete with 1,2-cyclohexanedione for the arginine residue. Regeneration of the arginine residue using hydroxylamine fully restored the enhancing ability of DAFP-1. These studies indicated that an arginine residue is critical for the enhancing ability of DAFP-1 and the guanidinium group of the arginine residue is important for its interaction with the enhancers, where the general mechanism of arginine-ligand interaction is borne. This work may initiate a complete mechanistic study of the enhancement effect in AFPs.

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Year:  2009        PMID: 19746966      PMCID: PMC2760095          DOI: 10.1021/bi901283p

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  32 in total

1.  Streptavidin in antibody pretargeting. 3. Comparison of biotin binding and tissue localization of 1,2-cyclohexanedione and succinic anhydride modified recombinant streptavidin.

Authors:  D Scott Wilbur; Donald K Hamlin; Damon L Meyer; Robert W Mallett; Janna Quinn; Robert L Vessella; Oliver W Press
Journal:  Bioconjug Chem       Date:  2002 May-Jun       Impact factor: 4.774

2.  Domain fishing: a first step in protein comparative modelling.

Authors:  B Contreras-Moreira; P A Bates
Journal:  Bioinformatics       Date:  2002-08       Impact factor: 6.937

3.  Enhancement of insect antifreeze protein activity by antibodies.

Authors:  D W Wu; J G Duman; L Xu
Journal:  Biochim Biophys Acta       Date:  1991-02-15

4.  Ice-binding mechanism of winter flounder antifreeze proteins.

Authors:  A Cheng; K M Merz
Journal:  Biophys J       Date:  1997-12       Impact factor: 4.033

5.  Mapping of disulfide bridges in antifreeze proteins from overwintering larvae of the beetle Dendroides canadensis.

Authors:  N Li; B A Chibber; F J Castellino; J G Duman
Journal:  Biochemistry       Date:  1998-05-05       Impact factor: 3.162

6.  Inhibition of growth of nonbasal planes in ice by fish antifreezes.

Authors:  J A Raymond; P Wilson; A L DeVries
Journal:  Proc Natl Acad Sci U S A       Date:  1989-02       Impact factor: 11.205

7.  Ice-binding structure and mechanism of an antifreeze protein from winter flounder.

Authors:  F Sicheri; D S Yang
Journal:  Nature       Date:  1995-06-01       Impact factor: 49.962

8.  Secondary structure of antifreeze proteins from overwintering larvae of the beetle Dendroides canadensis.

Authors:  N Li; B S Kendrick; M C Manning; J F Carpenter; J G Duman
Journal:  Arch Biochem Biophys       Date:  1998-12-01       Impact factor: 4.013

9.  Polycarboxylates enhance beetle antifreeze protein activity.

Authors:  Natapol Amornwittawat; Sen Wang; John G Duman; Xin Wen
Journal:  Biochim Biophys Acta       Date:  2008-06-14

10.  Enhancement of insect antifreeze protein activity by solutes of low molecular mass.

Authors:  N Li; C A Andorfer; J G Duman
Journal:  J Exp Biol       Date:  1998-08       Impact factor: 3.312

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  13 in total

1.  Antifreeze protein-induced selective crystallization of a new thermodynamically and kinetically less preferred molecular crystal.

Authors:  Sen Wang; Xin Wen; James A Golen; Josh F Arifin; Arnold L Rheingold
Journal:  Chemistry       Date:  2013-10-09       Impact factor: 5.236

2.  Arginine-rich polyplexes for gene delivery to neuronal cells.

Authors:  Viola B Morris; Vinod Labhasetwar
Journal:  Biomaterials       Date:  2015-05-22       Impact factor: 12.479

3.  Long-range protein-water dynamics in hyperactive insect antifreeze proteins.

Authors:  Konrad Meister; Simon Ebbinghaus; Yao Xu; John G Duman; Arthur DeVries; Martin Gruebele; David M Leitner; Martina Havenith
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-31       Impact factor: 11.205

4.  Effectiveness of Small Interfering RNA Delivery via Arginine-Rich Polyethylenimine-Based Polyplex in Metastatic and Doxorubicin-Resistant Breast Cancer Cells.

Authors:  Shan Lu; Viola B Morris; Vinod Labhasetwar
Journal:  J Pharmacol Exp Ther       Date:  2019-04-02       Impact factor: 4.030

5.  Interaction of reduced nicotinamide adenine dinucleotide with an antifreeze protein from Dendroides canadensis: mechanistic implication of antifreeze activity enhancement.

Authors:  Xin Wen; Sen Wang; Natapol Amornwittawat; Eric A Houghton; Michael A Sacco
Journal:  J Mol Recognit       Date:  2011 Nov-Dec       Impact factor: 2.137

6.  Thermodynamic Analysis of Thermal Hysteresis: Mechanistic Insights into Biological Antifreezes.

Authors:  Sen Wang; Natapol Amornwittawat; Xin Wen
Journal:  J Chem Thermodyn       Date:  2012-05-07       Impact factor: 3.178

7.  Antifreeze proteins govern the precipitation of trehalose in a freezing-avoiding insect at low temperature.

Authors:  Xin Wen; Sen Wang; John G Duman; Josh Fnu Arifin; Vonny Juwita; William A Goddard; Alejandra Rios; Fan Liu; Soo-Kyung Kim; Ravinder Abrol; Arthur L DeVries; Lawrence M Henling
Journal:  Proc Natl Acad Sci U S A       Date:  2016-05-25       Impact factor: 11.205

8.  Expanding the molecular recognition repertoire of antifreeze polypeptides: effects on nucleoside crystal growth.

Authors:  Sen Wang; Xin Wen; Pavle Nikolovski; Vonny Juwita; Josh Fnu Arifin
Journal:  Chem Commun (Camb)       Date:  2012-12-07       Impact factor: 6.222

9.  A beetle antifreeze protein protects lactate dehydrogenase under freeze-thawing.

Authors:  Celeste Rodriguez; Seyed Sajjadi; Ravinder Abrol; Xin Wen
Journal:  Int J Biol Macromol       Date:  2019-06-19       Impact factor: 8.025

10.  Molecular recognition of methyl α-D-mannopyranoside by antifreeze (glyco)proteins.

Authors:  Sen Wang; Xin Wen; Arthur L DeVries; Yelena Bagdagulyan; Alexander Morita; James A Golen; John G Duman; Arnold L Rheingold
Journal:  J Am Chem Soc       Date:  2014-06-11       Impact factor: 15.419

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