Literature DB >> 19740995

Why do phage play dice?

Mikkel Avlund1, Ian B Dodd, Szabolcs Semsey, Kim Sneppen, Sandeep Krishna.   

Abstract

Phage lambda is among the simplest organisms that make a developmental decision. An infected bacterium goes either into the lytic state, where the phage particles rapidly replicate and eventually lyse the cell, or into a lysogenic state, where the phage goes dormant and replicates along with the cell. Experimental observations by P. Kourilsky are consistent with a single phage infection deterministically choosing lysis and double infection resulting in a stochastic choice. We argue that the phage are playing a "game" of minimizing the chance of extinction and that the shift from determinism to stochasticity is due to a shift from a single-player to a multiplayer game. Crucial to the argument is the clonal identity of the phage.

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Year:  2009        PMID: 19740995      PMCID: PMC2772674          DOI: 10.1128/JVI.01057-09

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  12 in total

1.  The establishment of lysogenicity in Escherichia coli.

Authors:  M LIEB
Journal:  J Bacteriol       Date:  1953-06       Impact factor: 3.490

Review 2.  Switches in bacteriophage lambda development.

Authors:  Amos B Oppenheim; Oren Kobiler; Joel Stavans; Donald L Court; Sankar Adhya
Journal:  Annu Rev Genet       Date:  2005       Impact factor: 16.830

3.  Collective decision making in bacterial viruses.

Authors:  Joshua S Weitz; Yuriy Mileyko; Richard I Joh; Eberhard O Voit
Journal:  Biophys J       Date:  2008-06-20       Impact factor: 4.033

4.  Stochastic kinetic analysis of developmental pathway bifurcation in phage lambda-infected Escherichia coli cells.

Authors:  A Arkin; J Ross; H H McAdams
Journal:  Genetics       Date:  1998-08       Impact factor: 4.562

5.  Lysogenization by bacteriophage lambda. I. Multiple infection and the lysogenic response.

Authors:  P Kourilsky
Journal:  Mol Gen Genet       Date:  1973-04-12

6.  Lysogenization by bacteriophage lambda. III. Multiplicity dependent phenomena occuring upon infection by lambda.

Authors:  P Kourilsky; A Knapp
Journal:  Biochimie       Date:  1974       Impact factor: 4.079

7.  Lysogenization by bacteriophage lambda. II. Identification of genes involved in the multiplicity dependent processes.

Authors:  P Kourilsky
Journal:  Biochimie       Date:  1974       Impact factor: 4.079

8.  Establishment of repression by lambdoid phage in catabolite activator protein and adenylate cyclase mutants of Escherichia coli.

Authors:  T Grodzicker; R R Arditti; H Eisen
Journal:  Proc Natl Acad Sci U S A       Date:  1972-02       Impact factor: 11.205

9.  Quantitative study of sensitive and lysogenic bacteria surviving infection of a Staphylococcus by a temperate bacteriophage.

Authors:  J Goffart-Roskam
Journal:  Antonie Van Leeuwenhoek       Date:  1965       Impact factor: 2.271

10.  Determination of cell fate selection during phage lambda infection.

Authors:  François St-Pierre; Drew Endy
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-19       Impact factor: 11.205

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  18 in total

1.  How long can bacteriophage λ change its mind?

Authors:  Szabolcs Semsey; Christopher Campion; Abdu Mohamed; Sine Lo Svenningsen
Journal:  Bacteriophage       Date:  2015-01-30

2.  Targeted bacterial immunity buffers phage diversity.

Authors:  Jan O Haerter; Ala Trusina; Kim Sneppen
Journal:  J Virol       Date:  2011-08-03       Impact factor: 5.103

3.  Restriction-modification systems and bacteriophage invasion: who wins?

Authors:  Farida N Enikeeva; Konstantin V Severinov; Mikhail S Gelfand
Journal:  J Theor Biol       Date:  2010-07-13       Impact factor: 2.691

4.  Population Dynamics of Phage and Bacteria in Spatially Structured Habitats Using Phage λ and Escherichia coli.

Authors:  Namiko Mitarai; Stanley Brown; Kim Sneppen
Journal:  J Bacteriol       Date:  2016-05-27       Impact factor: 3.490

5.  Optimality of the spontaneous prophage induction rate.

Authors:  Michael G Cortes; Jonathan Krog; Gábor Balázsi
Journal:  J Theor Biol       Date:  2019-09-13       Impact factor: 2.691

6.  Minimal gene regulatory circuits for a lysis-lysogeny choice in the presence of noise.

Authors:  Mikkel Avlund; Sandeep Krishna; Szabolcs Semsey; Ian B Dodd; Kim Sneppen
Journal:  PLoS One       Date:  2010-12-20       Impact factor: 3.240

7.  To lyse or not to lyse: transient-mediated stochastic fate determination in cells infected by bacteriophages.

Authors:  Richard I Joh; Joshua S Weitz
Journal:  PLoS Comput Biol       Date:  2011-03-10       Impact factor: 4.475

8.  Studies on Escherichia coli HflKC suggest the presence of an unidentified λ factor that influences the lysis-lysogeny switch.

Authors:  Kaustav Bandyopadhyay; Pabitra K Parua; Ajit B Datta; Pradeep Parrack
Journal:  BMC Microbiol       Date:  2011-02-17       Impact factor: 3.605

Review 9.  The Baltimore Classification of Viruses 50 Years Later: How Does It Stand in the Light of Virus Evolution?

Authors:  Eugene V Koonin; Mart Krupovic; Vadim I Agol
Journal:  Microbiol Mol Biol Rev       Date:  2021-07-14       Impact factor: 13.044

10.  Evolution of virulence in emerging epidemics.

Authors:  Thomas W Berngruber; Rémy Froissart; Marc Choisy; Sylvain Gandon
Journal:  PLoS Pathog       Date:  2013-03-14       Impact factor: 6.823

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