Literature DB >> 19734668

Metabolic discrimination of Catharanthus roseus calli according to their relative locations using (1)H-NMR and principal component analysis.

Seung-Ok Yang1, So-Hyun Kim, Yujin Kim, Hee-Su Kim, Young-Jin Chun, Hyung-Kyoon Choi.   

Abstract

Creating a plant-cell suspension culture involves first transferring the callus into liquid media, but there are no objective criteria for selecting the location of the callus to be transferred. In this study, inner and outer cells of Catharanthus roseus with various elicitors in solid-state cultures were differentiated by (1)H NMR (nuclear magnetic resonance) spectrometry and principal component analysis (PCA). It was found that the samples of various elicitors and relative locations could be separated in PCA-derived score plots. Especially, there was a clear separation between nontreated samples and those cotreated with silver nitrate and methyl jasmonate. Loading-plot analysis was therefore applied to data obtained from nontreated samples and those cotreated with silver nitrate and methyl jasmonate to determine the separation of major metabolites on score plots. The levels of valine, lactic acid, threonine, alanine, arginine, acetic acid, malic acid, succinic acid, citric acid, asparagine, choline, lactose, fumaric acid, phenylalanine, tryptophan, and formic acid were higher in the inner callus than in the outer callus, whereas 2-oxoglutaric acid, oxalacetic acid, sucrose, and glucose dominated in the outer callus. The results obtained in this study suggest that inner and outer calli can be differentiated by (1)H-NMR-based metabolomic analysis.

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Year:  2009        PMID: 19734668     DOI: 10.1271/bbb.90240

Source DB:  PubMed          Journal:  Biosci Biotechnol Biochem        ISSN: 0916-8451            Impact factor:   2.043


  5 in total

1.  Tissue-Specific Metabolic Profile Study of Moringa oleifera L. Using Nuclear Magnetic Resonance Spectroscopy.

Authors:  Iqbal Mahmud; Kamal Chowdhury; Arezue Boroujerdi
Journal:  Plant Tissue Cult Biotechnol       Date:  2014-06

2.  Comparison of global metabolite extraction strategies for soybeans using UHPLC-HRMS.

Authors:  Iqbal Mahmud; Sandi Sternberg; Michael Williams; Timothy J Garrett
Journal:  Anal Bioanal Chem       Date:  2017-08-26       Impact factor: 4.142

3.  NMR-based metabolomics study of the biochemical relationship between sugarcane callus tissues and their respective nutrient culture media.

Authors:  Iqbal Mahmud; Monica Thapaliya; Arezue Boroujerdi; Kamal Chowdhury
Journal:  Anal Bioanal Chem       Date:  2014-07-11       Impact factor: 4.142

4.  Overexpression of ORCA3 and G10H in Catharanthus roseus plants regulated alkaloid biosynthesis and metabolism revealed by NMR-metabolomics.

Authors:  Qifang Pan; Quan Wang; Fang Yuan; Shihai Xing; Jingya Zhao; Young Hae Choi; Robert Verpoorte; Yuesheng Tian; Guofeng Wang; Kexuan Tang
Journal:  PLoS One       Date:  2012-08-20       Impact factor: 3.240

5.  Similar metabolic changes induced by HIPVs exposure as herbivore in Ammopiptanthus mongolicus.

Authors:  Jingru Sun; Xiao Zhang; Chuanjian Cao; Xindi Mei; Ningning Wang; Suli Yan; Shixiang Zong; Youqing Luo; Haijun Yang; Yingbai Shen
Journal:  PLoS One       Date:  2014-04-18       Impact factor: 3.240

  5 in total

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