Literature DB >> 19733229

TULIP1 (RALGAPA1) haploinsufficiency with brain development delay.

Keiko Shimojima1, Yuta Komoike, Jun Tohyama, Sonoko Takahashi, Marco T Páez, Eiji Nakagawa, Yuichi Goto, Kousaku Ohno, Mayu Ohtsu, Hirokazu Oguni, Makiko Osawa, Toru Higashinakagawa, Toshiyuki Yamamoto.   

Abstract

A novel microdeletion of 14q13.1q13.3 was identified in a patient with developmental delay and intractable epilepsy. The 2.2-Mb deletion included 15 genes, of which TULIP1 (approved gene symbol: RALGAPA1)was the only gene highly expressed in the brain. Western blotting revealed reduced amount of TULIP1 in cell lysates derived from immortalized lymphocytes of the patient, suggesting the association between TULIP1 haploinsufficiency and the patient's phenotype, then 140 patients were screened for TULIP1 mutations and four missense mutations were identified. Although all four missense mutations were common with parents, reduced TULIP1 was observed in the cell lysates with a P297T mutation identified in a conserved region among species. A full-length homolog of human TULIP1 was identified in zebrafish with 72% identity to human. Tulip1 was highly expressed in zebrafish brain, and knockdown of which resulted in brain developmental delay. Therefore, we suggest that TULIP1 is a candidate gene for developmental delay.

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Year:  2009        PMID: 19733229     DOI: 10.1016/j.ygeno.2009.08.015

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  11 in total

1.  Bi-allelic Variants in RALGAPA1 Cause Profound Neurodevelopmental Disability, Muscular Hypotonia, Infantile Spasms, and Feeding Abnormalities.

Authors:  Matias Wagner; Yuliya Skorobogatko; Ben Pode-Shakked; Cynthia M Powell; Bader Alhaddad; Annette Seibt; Ortal Barel; Gali Heimer; Chen Hoffmann; Laurie A Demmer; Yezmin Perilla-Young; Marc Remke; Dagmar Wieczorek; Tharsini Navaratnarajah; Peter Lichtner; Dirk Klee; Hanan E Shamseldin; Fuad Al Mutairi; Ertan Mayatepek; Tim Strom; Thomas Meitinger; Fowzan S Alkuraya; Yair Anikster; Alan R Saltiel; Felix Distelmaier
Journal:  Am J Hum Genet       Date:  2020-01-30       Impact factor: 11.025

2.  An emerging phenotype of Xq22 microdeletions in females with severe intellectual disability, hypotonia and behavioral abnormalities.

Authors:  Toshiyuki Yamamoto; Anna Wilsdon; Shelagh Joss; Bertrand Isidor; Anna Erlandsson; Mohnish Suri; Noriko Sangu; Shino Shimada; Keiko Shimojima; Cédric Le Caignec; Lena Samuelsson; Margarita Stefanova
Journal:  J Hum Genet       Date:  2014-03-20       Impact factor: 3.172

3.  The GTPase activating Rap/RanGAP domain-like 1 gene is associated with chicken reproductive traits.

Authors:  Xu Shen; Hua Zeng; Liang Xie; Jun He; Jian Li; Xiujuan Xie; Chenglong Luo; Haiping Xu; Min Zhou; Qinghua Nie; Xiquan Zhang
Journal:  PLoS One       Date:  2012-04-09       Impact factor: 3.240

4.  Whole exome sequencing reveals recurrent mutations in BRCA2 and FAT genes in acinar cell carcinomas of the pancreas.

Authors:  Toru Furukawa; Hitomi Sakamoto; Shoko Takeuchi; Mitra Ameri; Yuko Kuboki; Toshiyuki Yamamoto; Takashi Hatori; Masakazu Yamamoto; Masanori Sugiyama; Nobuyuki Ohike; Hiroshi Yamaguchi; Michio Shimizu; Noriyuki Shibata; Kyoko Shimizu; Keiko Shiratori
Journal:  Sci Rep       Date:  2015-03-06       Impact factor: 4.379

5.  Single nucleotide variations in CLCN6 identified in patients with benign partial epilepsies in infancy and/or febrile seizures.

Authors:  Toshiyuki Yamamoto; Keiko Shimojima; Noriko Sangu; Yuta Komoike; Atsushi Ishii; Shinpei Abe; Shintaro Yamashita; Katsumi Imai; Tetsuo Kubota; Tatsuya Fukasawa; Tohru Okanishi; Hideo Enoki; Takuya Tanabe; Akira Saito; Toru Furukawa; Toshiaki Shimizu; Carol J Milligan; Steven Petrou; Sarah E Heron; Leanne M Dibbens; Shinichi Hirose; Akihisa Okumura
Journal:  PLoS One       Date:  2015-03-20       Impact factor: 3.240

6.  A Video Report of Brain-Lung-Thyroid Syndrome in a Japanese Female With a Novel Frameshift Mutation of the NKX2-1 Gene.

Authors:  Takenori Tozawa; Kenji Yokochi; Satoshi Kono; Takashi Konishi; Toshiyuki Yamamoto; Akira Nishimura; Tomohiro Chiyonobu; Masafumi Morimoto; Hajime Hosoi
Journal:  Child Neurol Open       Date:  2016-08-24

7.  A de novo microdeletion involving PAFAH1B (LIS1) related to lissencephaly phenotype.

Authors:  Keiko Shimojima; Akihisa Okumura; Toshiyuki Yamamoto
Journal:  Data Brief       Date:  2015-07-23

Review 8.  14q12q13.2 microdeletion syndrome: Clinical characterization of a new patient, review of the literature, and further evidence of a candidate region for CNS anomalies.

Authors:  Emanuela Ponzi; Mattia Gentile; Emanuele Agolini; Emilia Matera; Roberto Palumbi; Antonia Lucia Buonadonna; Antonia Peschechera; Alessandra Gabellone; Maria Fatima Antonucci; Lucia Margari
Journal:  Mol Genet Genomic Med       Date:  2020-05-16       Impact factor: 2.183

9.  A novel 14q13.1-21.1 deletion identified by CNV-Seq in a patient with brain-lung-thyroid syndrome, tooth agenesis and immunodeficiency.

Authors:  Xuyun Hu; Jun Liu; Ruolan Guo; Jun Guo; Zhipeng Zhao; Wei Li; Baoping Xu; Chanjuan Hao
Journal:  Mol Cytogenet       Date:  2019-12-19       Impact factor: 2.009

10.  A DNA methylation signature discriminates between excellent and non-response to lithium in patients with bipolar disorder type 1.

Authors:  C Marie-Claire; F X Lejeune; E Mundwiller; D Ulveling; I Moszer; F Bellivier; B Etain
Journal:  Sci Rep       Date:  2020-07-22       Impact factor: 4.379

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