Literature DB >> 19731809

Temporal and spatial regulation of V(D)J recombination: interactions of extrinsic factors with the RAG complex.

Yun Liu1, Li Zhang, Stephen Desiderio.   

Abstract

In the course of lymphoid development, V(D)J recombination is subject to stringent locus-specific and temporal regulation. These constraints are ultimately responsible for several features peculiar to lymphoid development, including the lineage specificity of antigen receptor assembly, allelic exclusion and receptor editing. In addition, cell cycle phase-dependent regulation of V(D)J recombinase activity ensures that DNA rearrangement is completed by the appropriate mechanism of DNA repair. Regulation of V(D)J recombination involves interactions between the V(D)J recombinase--a heteromeric complex consisting of RAG-1 and RAG-2 subunits--and macromolecular assemblies extrinsic to the recombinase. This chapter will focus on those features of the recombinase itself--and in particular the RAG-2 subunit--that interact with extrinsic factors to establish patterns of temporal control and locus specificity in developing lymphocytes.

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Year:  2009        PMID: 19731809      PMCID: PMC2875152          DOI: 10.1007/978-1-4419-0296-2_13

Source DB:  PubMed          Journal:  Adv Exp Med Biol        ISSN: 0065-2598            Impact factor:   2.622


  83 in total

1.  Epigenetic ontogeny of the Igk locus during B cell development.

Authors:  Maya Goldmit; Yanhong Ji; Jane Skok; Esther Roldan; Steffen Jung; Howard Cedar; Yehudit Bergman
Journal:  Nat Immunol       Date:  2004-12-26       Impact factor: 25.606

2.  Ubiquitylation of RAG-2 by Skp2-SCF links destruction of the V(D)J recombinase to the cell cycle.

Authors:  Hao Jiang; Fu-Chung Chang; Ashley E Ross; Jihyun Lee; Keiichi Nakayama; Keiko Nakayama; Stephen Desiderio
Journal:  Mol Cell       Date:  2005-06-10       Impact factor: 17.970

3.  A direct interaction between the RAG2 C terminus and the core histones is required for efficient V(D)J recombination.

Authors:  Kelly L West; Netai C Singha; Pablo De Ioannes; Lynne Lacomis; Hediye Erdjument-Bromage; Paul Tempst; Patricia Cortes
Journal:  Immunity       Date:  2005-08       Impact factor: 31.745

4.  Double chromodomains cooperate to recognize the methylated histone H3 tail.

Authors:  John F Flanagan; Li-Zhi Mi; Maksymilian Chruszcz; Marcin Cymborowski; Katrina L Clines; Youngchang Kim; Wladek Minor; Fraydoon Rastinejad; Sepideh Khorasanizadeh
Journal:  Nature       Date:  2005-12-22       Impact factor: 49.962

5.  Nucleosome structure completely inhibits in vitro cleavage by the V(D)J recombinase.

Authors:  A Golding; S Chandler; E Ballestar; A P Wolffe; M S Schlissel
Journal:  EMBO J       Date:  1999-07-01       Impact factor: 11.598

6.  Recognition of histone H3 lysine-4 methylation by the double tudor domain of JMJD2A.

Authors:  Ying Huang; Jia Fang; Mark T Bedford; Yi Zhang; Rui-Ming Xu
Journal:  Science       Date:  2006-04-06       Impact factor: 47.728

7.  Histone H2B ubiquitylation is associated with elongating RNA polymerase II.

Authors:  Tiaojiang Xiao; Cheng-Fu Kao; Nevan J Krogan; Zu-Wen Sun; Jack F Greenblatt; Mary Ann Osley; Brian D Strahl
Journal:  Mol Cell Biol       Date:  2005-01       Impact factor: 4.272

8.  Human but not yeast CHD1 binds directly and selectively to histone H3 methylated at lysine 4 via its tandem chromodomains.

Authors:  Robert J Sims; Chi-Fu Chen; Helena Santos-Rosa; Tony Kouzarides; Smita S Patel; Danny Reinberg
Journal:  J Biol Chem       Date:  2005-10-31       Impact factor: 5.157

9.  ING2 PHD domain links histone H3 lysine 4 methylation to active gene repression.

Authors:  Xiaobing Shi; Tao Hong; Kay L Walter; Mark Ewalt; Eriko Michishita; Tiffany Hung; Dylan Carney; Pedro Peña; Fei Lan; Mohan R Kaadige; Nicolas Lacoste; Christelle Cayrou; Foteini Davrazou; Anjanabha Saha; Bradley R Cairns; Donald E Ayer; Tatiana G Kutateladze; Yang Shi; Jacques Côté; Katrin F Chua; Or Gozani
Journal:  Nature       Date:  2006-05-21       Impact factor: 49.962

Review 10.  The PHD finger, a nuclear protein-interaction domain.

Authors:  Mariann Bienz
Journal:  Trends Biochem Sci       Date:  2005-11-16       Impact factor: 13.807

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  3 in total

1.  Transcription-dependent mobilization of nucleosomes at accessible TCR gene segments in vivo.

Authors:  Hrisavgi D Kondilis-Mangum; Robin Milley Cobb; Oleg Osipovich; Sruti Srivatsan; Eugene M Oltz; Michael S Krangel
Journal:  J Immunol       Date:  2010-05-17       Impact factor: 5.422

Review 2.  The recent advances in non-homologous end-joining through the lens of lymphocyte development.

Authors:  Xiaobin S Wang; Brian J Lee; Shan Zha
Journal:  DNA Repair (Amst)       Date:  2020-06-25

Review 3.  The Complex Interplay between DNA Injury and Repair in Enzymatically Induced Mutagenesis and DNA Damage in B Lymphocytes.

Authors:  Mahnoush Bahjat; Jeroen E J Guikema
Journal:  Int J Mol Sci       Date:  2017-08-30       Impact factor: 5.923

  3 in total

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