Literature DB >> 19724129

Expression, purification and preliminary X-ray analysis of proliferating cell nuclear antigen from the archaeon Thermococcus thioreducens.

Miranda L Byrne-Steele1, Joseph D Ng.   

Abstract

Proliferating cell nuclear antigen (PCNA) is a DNA sliding clamp which confers processivity on replicative DNA polymerases. PCNA also acts as a sliding platform that enables the association of many DNA-processing proteins with DNA in a non-sequence-specific manner. In this investigation, the PCNA from the hyperthermophilic archaeon Thermococcus thioreducens (TtPCNA) was cloned, overexpressed in Escherichia coli and purified to greater than 90% homogeneity. TtPCNA crystals were obtained by sitting-drop vapor-diffusion methods and the best ordered crystal diffracted to 1.86 A resolution using synchrotron radiation. The crystals belonged to the hexagonal space group P6(3), with unit-cell parameters a = b = 89.0, c = 62.8 A. Crystals of TtPCNA proved to be amenable to complete X-ray analysis and future structure determination.

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Year:  2009        PMID: 19724129      PMCID: PMC2795597          DOI: 10.1107/S174430910903036X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  23 in total

1.  A heterotrimeric PCNA in the hyperthermophilic archaeon Sulfolobus solfataricus.

Authors:  Isabelle Dionne; Ravi K Nookala; Stephen P Jackson; Aidan J Doherty; Stephen D Bell
Journal:  Mol Cell       Date:  2003-01       Impact factor: 17.970

2.  Three-dimensional structure of the beta subunit of E. coli DNA polymerase III holoenzyme: a sliding DNA clamp.

Authors:  X P Kong; R Onrust; M O'Donnell; J Kuriyan
Journal:  Cell       Date:  1992-05-01       Impact factor: 41.582

3.  The CCP4 suite: programs for protein crystallography.

Authors: 
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1994-09-01

4.  Stoichiometric complex formation by proliferating cell nuclear antigen (PCNA) and its interacting protein: purification and crystallization of the DNA polymerase and PCNA monomer mutant complex from Pyrococcus furiosus.

Authors:  Hirokazu Nishida; Shigeki Matsumiya; Daisuke Tsuchiya; Yoshizumi Ishino; Kosuke Morikawa
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-02-24

Review 5.  The puzzle of PCNA's many partners.

Authors:  E Warbrick
Journal:  Bioessays       Date:  2000-11       Impact factor: 4.345

6.  Crystal structure of an archaeal DNA sliding clamp: proliferating cell nuclear antigen from Pyrococcus furiosus.

Authors:  S Matsumiya; Y Ishino; K Morikawa
Journal:  Protein Sci       Date:  2001-01       Impact factor: 6.725

7.  Structural basis for FEN-1 substrate specificity and PCNA-mediated activation in DNA replication and repair.

Authors:  Brian R Chapados; David J Hosfield; Seungil Han; Junzhuan Qiu; Biana Yelent; Binghui Shen; John A Tainer
Journal:  Cell       Date:  2004-01-09       Impact factor: 41.582

Review 8.  Proliferating cell nuclear antigen (PCNA): a dancer with many partners.

Authors:  Giovanni Maga; Ulrich Hubscher
Journal:  J Cell Sci       Date:  2003-08-01       Impact factor: 5.285

9.  Crystal structure of a DNA polymerase sliding clamp from a Gram-positive bacterium.

Authors:  Maria A Argiriadi; Eric R Goedken; Irina Bruck; Mike O'Donnell; John Kuriyan
Journal:  BMC Struct Biol       Date:  2006-01-10

10.  Structure of an archaeal PCNA1-PCNA2-FEN1 complex: elucidating PCNA subunit and client enzyme specificity.

Authors:  Andrew S Doré; Mairi L Kilkenny; Sarah A Jones; Antony W Oliver; S Mark Roe; Stephen D Bell; Laurence H Pearl
Journal:  Nucleic Acids Res       Date:  2006-08-31       Impact factor: 16.971

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  2 in total

1.  Effects of pressure on the dynamics of an oligomeric protein from deep-sea hyperthermophile.

Authors:  Utsab R Shrestha; Debsindhu Bhowmik; John R D Copley; Madhusudan Tyagi; Juscelino B Leão; Xiang-qiang Chu
Journal:  Proc Natl Acad Sci U S A       Date:  2015-10-26       Impact factor: 11.205

2.  Trace fluorescent labeling for protein crystallization.

Authors:  Marc Pusey; Jorge Barcena; Michelle Morris; Anuj Singhal; Qunying Yuan; Joseph Ng
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-06-27       Impact factor: 1.056

  2 in total

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