Literature DB >> 19722721

Heme regulation of human cystathionine beta-synthase activity: insights from fluorescence and Raman spectroscopy.

Colin L Weeks1, Sangita Singh, Peter Madzelan, Ruma Banerjee, Thomas G Spiro.   

Abstract

Cystathionine beta-synthase (CBS) plays a central role in homocysteine metabolism, and malfunction of the enzyme leads to homocystinuria, a devastating metabolic disease. CBS contains a pyridoxal 5'-phosphate (PLP) cofactor which catalyzes the synthesis of cystathionine from homocysteine and serine. Mammalian forms of the enzyme also contain a heme group, which is not involved in catalysis. It may, however, play a regulatory role, since the enzyme is inhibited when CO or NO are bound to the heme. We have investigated the mechanism of this inhibition using fluorescence and resonance Raman spectroscopies. CO binding is found to induce a tautomeric shift of the PLP from the ketoenamine to the enolimine form. The ketoenamine is key to PLP reactivity because its imine C horizontal lineN bond is protonated, facilitating attack by the nucleophilic substrate, serine. The same tautomer shift is also induced by heat inactivation of Fe(II)CBS, or by an Arg266Met replacement in Fe(II)CBS, which likewise inactivates the enzyme; in both cases the endogenous Cys52 ligand to the heme is replaced by another, unidentified ligand. CO binding also displaces Cys52 from the heme. We propose that the tautomer shift results from loss of a stabilizing H-bond from Asn149 to the PLP ring O3' atom, which is negatively charged in the ketoenamine tautomer. This loss would be induced by displacement of the PLP as a result of breaking the salt bridge between Cys52 and Arg266, which resides on a short helix that is also anchored to the PLP via H-bonds to its phosphate group. The salt bridge would be broken when Cys52 is displaced from the heme. Cys52 protonation is inferred to be the rate-limiting step in breaking the salt bridge, since the rate of the tautomer shift, following CO binding, increases with decreasing pH. In addition, elevation of the concentration of phosphate buffer was found to diminish the rate and extent of the tautomer shift, suggesting a ketoenamine-stabilizing phosphate binding site, possibly at the protonated imine bond of the PLP. Implications of these findings for CBS regulation are discussed.

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Year:  2009        PMID: 19722721      PMCID: PMC2746071          DOI: 10.1021/ja904468w

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  59 in total

1.  Pyridoxal phosphate binding sites are similar in human heme-dependent and yeast heme-independent cystathionine beta-synthases. Evidence from 31P NMR and pulsed EPR spectroscopy that heme and PLP cofactors are not proximal in the human enzyme.

Authors:  O Kabil; S Toaka; R LoBrutto; R Shoemaker; R Banerjee
Journal:  J Biol Chem       Date:  2001-02-26       Impact factor: 5.157

2.  Expression of heme oxygenase-1 in the lung in chronic hypoxia.

Authors:  M S Carraway; A J Ghio; J D Carter; C A Piantadosi
Journal:  Am J Physiol Lung Cell Mol Physiol       Date:  2000-04       Impact factor: 5.464

3.  Characterization of transsulfuration and cysteine biosynthetic pathways in the protozoan hemoflagellate, Trypanosoma cruzi. Isolation and molecular characterization of cystathionine beta-synthase and serine acetyltransferase from Trypanosoma.

Authors:  T Nozaki; Y Shigeta; Y Saito-Nakano; M Imada; W D Kruger
Journal:  J Biol Chem       Date:  2000-12-05       Impact factor: 5.157

4.  Domain architecture of the heme-independent yeast cystathionine beta-synthase provides insights into mechanisms of catalysis and regulation.

Authors:  K H Jhee; P McPhie; E W Miles
Journal:  Biochemistry       Date:  2000-08-29       Impact factor: 3.162

5.  Regulation of human cystathionine beta-synthase by S-adenosyl-L-methionine: evidence for two catalytically active conformations involving an autoinhibitory domain in the C-terminal region.

Authors:  M Janosík; V Kery; M Gaustadnes; K N Maclean; J P Kraus
Journal:  Biochemistry       Date:  2001-09-04       Impact factor: 3.162

6.  Initial velocity, spectral, and pH studies of the serine-glyoxylate aminotransferase from Hyphomicrobiuim methylovorum.

Authors:  W E Karsten; T Ohshiro; Y Izumi; P F Cook
Journal:  Arch Biochem Biophys       Date:  2001-04-15       Impact factor: 4.013

7.  Structure of human cystathionine beta-synthase: a unique pyridoxal 5'-phosphate-dependent heme protein.

Authors:  M Meier; M Janosik; V Kery; J P Kraus; P Burkhard
Journal:  EMBO J       Date:  2001-08-01       Impact factor: 11.598

8.  Resonance Raman characterization of the heme cofactor in cystathionine beta-synthase. Identification of the Fe-S(Cys) vibration in the six-coordinate low-spin heme.

Authors:  E L Green; S Taoka; R Banerjee; T M Loehr
Journal:  Biochemistry       Date:  2001-01-16       Impact factor: 3.162

9.  Functional properties of the active core of human cystathionine beta-synthase crystals.

Authors:  S Bruno; F Schiaretti; P Burkhard; J P Kraus; M Janosik; A Mozzarelli
Journal:  J Biol Chem       Date:  2001-01-05       Impact factor: 5.157

10.  Modulation of the heme electronic structure and cystathionine beta-synthase activity by second coordination sphere ligands: The role of heme ligand switching in redox regulation.

Authors:  Sangita Singh; Peter Madzelan; Jay Stasser; Colin L Weeks; Donald Becker; Thomas G Spiro; James Penner-Hahn; Ruma Banerjee
Journal:  J Inorg Biochem       Date:  2009-01-22       Impact factor: 4.155

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  29 in total

1.  Effect of the disease-causing R266K mutation on the heme and PLP environments of human cystathionine β-synthase.

Authors:  Aaron T Smith; Yang Su; Daniel J Stevens; Tomas Majtan; Jan P Kraus; Judith N Burstyn
Journal:  Biochemistry       Date:  2012-07-31       Impact factor: 3.162

Review 2.  PLP-dependent H(2)S biogenesis.

Authors:  Sangita Singh; Ruma Banerjee
Journal:  Biochim Biophys Acta       Date:  2011-02-17

Review 3.  Hydrogen sulfide and hemeproteins: knowledge and mysteries.

Authors:  Ruth Pietri; Elddie Román-Morales; Juan López-Garriga
Journal:  Antioxid Redox Signal       Date:  2011-04-08       Impact factor: 8.401

4.  Allosteric communication between the pyridoxal 5'-phosphate (PLP) and heme sites in the H2S generator human cystathionine β-synthase.

Authors:  Pramod Kumar Yadav; Peter Xie; Ruma Banerjee
Journal:  J Biol Chem       Date:  2012-09-12       Impact factor: 5.157

5.  Chaperone therapy for homocystinuria: the rescue of CBS mutations by heme arginate.

Authors:  Petra Melenovská; Jana Kopecká; Jakub Krijt; Aleš Hnízda; Kateřina Raková; Miroslav Janošík; Bridget Wilcken; Viktor Kožich
Journal:  J Inherit Metab Dis       Date:  2014-10-21       Impact factor: 4.982

6.  Kinetics of reversible reductive carbonylation of heme in human cystathionine β-synthase.

Authors:  Sebastián Carballal; Ernesto Cuevasanta; Inés Marmisolle; Omer Kabil; Carmen Gherasim; David P Ballou; Ruma Banerjee; Beatriz Alvarez
Journal:  Biochemistry       Date:  2013-06-21       Impact factor: 3.162

7.  Kinetics of Nitrite Reduction and Peroxynitrite Formation by Ferrous Heme in Human Cystathionine β-Synthase.

Authors:  Sebastián Carballal; Ernesto Cuevasanta; Pramod K Yadav; Carmen Gherasim; David P Ballou; Beatriz Alvarez; Ruma Banerjee
Journal:  J Biol Chem       Date:  2016-02-11       Impact factor: 5.157

8.  Structural basis of regulation and oligomerization of human cystathionine β-synthase, the central enzyme of transsulfuration.

Authors:  June Ereño-Orbea; Tomas Majtan; Iker Oyenarte; Jan P Kraus; Luis Alfonso Martínez-Cruz
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-16       Impact factor: 11.205

Review 9.  Chemical Biology of H2S Signaling through Persulfidation.

Authors:  Milos R Filipovic; Jasmina Zivanovic; Beatriz Alvarez; Ruma Banerjee
Journal:  Chem Rev       Date:  2017-11-07       Impact factor: 60.622

Review 10.  Catalytic promiscuity and heme-dependent redox regulation of H2S synthesis.

Authors:  Ruma Banerjee
Journal:  Curr Opin Chem Biol       Date:  2017-03-07       Impact factor: 8.822

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