Literature DB >> 19719671

Bacterial diversity in a subseafloor habitat following a deep-sea volcanic eruption.

Julie A Huber1, David A Butterfield, John A Baross.   

Abstract

Abstract The bacterial diversity in a diffuse flow hydrothermal vent habitat at Axial Volcano, Juan de Fuca Ridge was examined shortly after an eruptive event in 1998 and again in 1999 and 2000 using PCR-amplified 16S rRNA gene sequence analyses. While considerable overlap with deep-sea background seawater was found within the alpha- and gamma-proteobacteria, unique subseafloor phylotypes were distinguishable. These included diverse members of the epsilon-proteobacteria, high temperature groups such as Desulfurobacterium, Gram-positive bacteria, and members of novel candidate divisions WS6 and ABY1. Phylotype richness was highest in the particle-attached populations from all three sampling periods, and diversity appeared to increase over that time, particularly among the epsilon-proteobacteria. A preliminary model of the subseafloor is presented that relates microbial diversity to temperature, chemical characteristics of diffuse flow fluids and the degree of mixing with seawater.

Entities:  

Year:  2003        PMID: 19719671     DOI: 10.1111/j.1574-6941.2003.tb01080.x

Source DB:  PubMed          Journal:  FEMS Microbiol Ecol        ISSN: 0168-6496            Impact factor:   4.194


  47 in total

1.  Abundance of reverse tricarboxylic acid cycle genes in free-living microorganisms at deep-sea hydrothermal vents.

Authors:  Barbara J Campbell; S Craig Cary
Journal:  Appl Environ Microbiol       Date:  2004-10       Impact factor: 4.792

2.  A hydrothermal seep on the Costa Rica margin: middle ground in a continuum of reducing ecosystems.

Authors:  Lisa A Levin; Victoria J Orphan; Greg W Rouse; Anthony E Rathburn; William Ussler; Geoffrey S Cook; Shana K Goffredi; Elena M Perez; Anders Waren; Benjamin M Grupe; Grayson Chadwick; Bruce Strickrott
Journal:  Proc Biol Sci       Date:  2012-03-07       Impact factor: 5.349

3.  Microbial diversity in the deep sea and the underexplored "rare biosphere".

Authors:  Mitchell L Sogin; Hilary G Morrison; Julie A Huber; David Mark Welch; Susan M Huse; Phillip R Neal; Jesus M Arrieta; Gerhard J Herndl
Journal:  Proc Natl Acad Sci U S A       Date:  2006-07-31       Impact factor: 11.205

Review 4.  Recent developments in the thermophilic microbiology of deep-sea hydrothermal vents.

Authors:  Margarita L Miroshnichenko; Elizaveta A Bonch-Osmolovskaya
Journal:  Extremophiles       Date:  2006-01-18       Impact factor: 2.395

5.  Stability and change in estuarine biofilm bacterial community diversity.

Authors:  Joseph A Moss; Andreas Nocker; Joe E Lepo; Richard A Snyder
Journal:  Appl Environ Microbiol       Date:  2006-09       Impact factor: 4.792

6.  Characterization of the depth-related changes in the microbial communities in Lake Hovsgol sediment by 16S rRNA gene-based approaches.

Authors:  Young-Do Nam; Youlboong Sung; Ho-Won Chang; Seong Woon Roh; Kyoung-Ho Kim; Sung-Keun Rhee; Jung-Chan Kim; Joo-Yong Kim; Jung-Hoon Yoon; Jin-Woo Bae
Journal:  J Microbiol       Date:  2008-06-11       Impact factor: 3.422

7.  Thiosulfate oxidation by Thiomicrospira thermophila: metabolic flexibility in response to ambient geochemistry.

Authors:  J L Houghton; D I Foustoukos; T M Flynn; C Vetriani; Alexander S Bradley; D A Fike
Journal:  Environ Microbiol       Date:  2016-03-21       Impact factor: 5.491

8.  Comparison of species richness estimates obtained using nearly complete fragments and simulated pyrosequencing-generated fragments in 16S rRNA gene-based environmental surveys.

Authors:  Noha Youssef; Cody S Sheik; Lee R Krumholz; Fares Z Najar; Bruce A Roe; Mostafa S Elshahed
Journal:  Appl Environ Microbiol       Date:  2009-06-26       Impact factor: 4.792

Review 9.  Microbial ecology of the dark ocean above, at, and below the seafloor.

Authors:  Beth N Orcutt; Jason B Sylvan; Nina J Knab; Katrina J Edwards
Journal:  Microbiol Mol Biol Rev       Date:  2011-06       Impact factor: 11.056

10.  Phylogenetic diversity of nitrogenase (nifH) genes in deep-sea and hydrothermal vent environments of the Juan de Fuca Ridge.

Authors:  Mausmi P Mehta; David A Butterfield; John A Baross
Journal:  Appl Environ Microbiol       Date:  2003-02       Impact factor: 4.792

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