| Literature DB >> 19713236 |
Alex J Elliot1, Cassandra Powers, Alicia Thornton, Chinelo Obi, Caterina Hill, Ian Simms, Pauline Waight, Helen Maguire, David Foord, Enid Povey, Tim Wreghitt, Nichola Goddard, Joanna Ellis, Alison Bermingham, Praveen Sebastianpillai, Angie Lackenby, Maria Zambon, David Brown, Gillian E Smith, O Noel Gill.
Abstract
OBJECTIVE: To evaluate ascertainment of the onset of community transmission of influenza A/H1N1 2009 (swine flu) in England during the earliest phase of the epidemic through comparing data from two surveillance systems.Entities:
Mesh:
Year: 2009 PMID: 19713236 PMCID: PMC2733951 DOI: 10.1136/bmj.b3403
Source DB: PubMed Journal: BMJ ISSN: 0959-8138

Ascertainment of cases of influenza A/H1N1 2009 in the NHS Direct self swabbing scheme and by Health Protection Agency regional laboratories in England during June 2009
Overall weekly test results of NHS Direct callers and individuals suspected of swine flu according to the clinical algorithm in six regions of England, 24 May to 30 June 2009
| Week ending Tuesday 2 June* | Week ending Tuesday 9 June | Week ending Tuesday 16 June | Week ending Tuesday 23 June | Week ending Tuesday 30 June | Five week summary | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| x/n | Proportion positive | 95% CI | x/n | Proportion positive | 95% CI | x/n | Proportion positive | 95% CI | x/n | Proportion positive | 95% CI | x/n | Proportion positive | 95% CI | x/n | Proportion positive | 95% CI | |
| Total | 0/55 | 0% | 0% to 6% | 2/252 | 1% | 0% to 3% | 12/346 | 3% | 1% to 6% | 30/410 | 7% | 5% to 10% | 47/322 | 15% | 11% to 19% | 91/1385 | 7% | 5% to 8% |
| Under 16s | 46/165 | 38% | 21% to 35% | 101/379 | 27% | 22% to 31% | 466/1072 | 43% | 40% to 46% | 1349/2977 | 45% | 44% to 47% | 1617/3288 | 49% | 47% to 51% | 3579/7881 | 45% | 44% to 47% |
| 16 and over | 75/482 | 16% | 12% to 19% | 86/772 | 11% | 9% to 14% | 263/1742 | 15% | 13% to 17% | 863/3966 | 22% | 20% to 23% | 1315/4769 | 28% | 26% to 29% | 2602/11731 | 22% | 21% to 23% |
| Total | 124/656 | 19% | 16% to 22% | 189/1167 | 16% | 14% to 18% | 736/2854 | 26% | 24% to 27% | 2248/7062 | 32% | 31% to 33% | 2979/8218 | 36% | 35% to 37% | 6276/19957 | 31% | 31% to 32% |
The following six regions of England were sampled: the North East; the East Midlands; the East of England; the South East; London; and the West Midlands.
Exact binomial confidence intervals have been calculated for all data.
*NHS Direct self sampling initiated on 28 May 2009.
†Results from self obtained samples are by week of self swab.
‡Health Protection Agency regional laboratory results are by week of swab.
§Total includes laboratory results without age of the patient and, therefore, these data are not included within the age breakdown data.
Overall weekly test results of NHS Direct callers and individuals suspected of swine flu according to the clinical algorithm in six regions of England, 24 May to 30 June 2009
| Week ending Tuesday 2 June* | Week ending Tuesday 9 June | Week ending Tuesday 16 June | Week ending Tuesday 23 June | Week ending Tuesday 30 June | Five week summary | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| x/n | Proportion positive | 95% CI | x/n | Proportion positive | 95% CI | x/n | Proportion positive | 95% CI | x/n | Proportion positive | 95% CI | x/n | Proportion positive | 95% CI | x/n | Proportion positive | 95% CI | |
| North East | ||||||||||||||||||
| Self obtained samples from NHS Direct callers† | 0/3 | 0% | 0% to 71% | 0/9 | 0% | 0% to 34% | 1/18 | 6% | 0% to 27% | 0/31 | 0% | 0% to 11% | 1/12 | 8% | 0% to 38% | 2/73 | 3% | 0% to 10% |
| Clinical samples from suspect cases of swine flu‡ | 0/12 | 0% | 0% to 26% | 25/88 | 25% | 19% to 39% | 9/160 | 6% | 3% to 10% | 10/193 | 5% | 3% to 9% | 18/204 | 9% | 5% to 14% | 62/657 | 10% | 7% to 12% |
| East Midlands | ||||||||||||||||||
| Self obtained samples from NHS Direct callers† | 0/4 | 0% | 0% to 60% | 0/23 | 0% | 0% to 15% | 0/39 | 0% | 0% to 9% | 1/29 | 3% | 0% to 18% | 1/26 | 4% | 0% to 20% | 2/121 | 2% | 0% to 6% |
| Clinical samples from suspect cases of swine flu‡ | 5/34 | 15% | 5% to 31% | 4/68 | 6% | 2% to 14% | 5/102 | 5% | 1% to 11% | 47/273 | 17% | 13% to 22% | 124/528 | 23% | 20% to 27% | 185/1005 | 18% | 16% to 21% |
| East of England | ||||||||||||||||||
| Self obtained samples from NHS Direct callers† | 0/10 | 0% | 0% to 31% | 0/35 | 0% | 0% to 10% | 0/38 | 0% | 0% to 9% | 4/41 | 10% | 3% to 23% | 2/47 | 4% | 1% to 15% | 6/171 | 4% | 1% to 7% |
| Clinical samples from suspect cases of swine flu‡ | 23/62 | 37% | 25% to 50% | 6/100 | 6% | 2% to 13% | 19/164 | 12% | 7% to 17% | 116/428 | 27% | 23% to 32% | 232/813 | 29% | 25% to 32% | 396/1567 | 25% | 23% to 27% |
| South East | ||||||||||||||||||
| Self obtained samples from NHS Direct callers† | 0/15 | 0% | 0% to 22% | 0/59 | 0% | 0% to 6% | 0/73 | 0% | 0% to 5% | 3/66 | 5% | 1% to 13% | 8/64 | 13% | 6% to 23% | 11/277 | 4% | 2% to 7% |
| Clinical samples from suspect cases of swine flu‡ | 44/218 | 20% | 15% to 26% | 21/355 | 6% | 4% to 9% | 55/451 | 12% | 9% to 16% | 248/1182 | 21% | 19% to 23% | 350/1495 | 23% | 21% to 26% | 718/3701 | 19% | 18% to 21% |
| London | ||||||||||||||||||
| Self obtained samples from NHS Direct callers† | 0/17 | 0% | 0% to 20% | 0/69 | 0% | 0% to 5% | 3/65 | 5% | 1% to 13% | 10/99 | 10% | 5% to 18% | 21/91 | 23% | 15% to 33% | 34/341 | 10% | 7% to 14% |
| Clinical samples from suspect cases of swine flu‡ | 25/164 | 15% | 10% to 22% | 36/256 | 14% | 10% to 19% | 201/702 | 29% | 25% to 32% | 930/2523 | 37% | 35% to 39% | 1144/2545 | 45% | 43% to 47% | 2336/6190 | 38% | 37% to 39% |
| West Midlands | ||||||||||||||||||
| Self obtained samples from NHS Direct callers† | 0/6 | 0% | 0% to 46% | 2/57 | 4% | 0% to 12% | 8/113 | 7% | 3% to 13% | 12/144 | 8% | 4% to 14% | 14/82 | 17% | 10% to 27% | 36/402 | 9% | 6% to 12% |
| Clinical samples from suspect cases of swine flu‡ | 27/166 | 16% | 11% to 23% | 97/300 | 32% | 27% to 38% | 447/1275 | 35% | 32% to 38% | 897/2463 | 36% | 35% to 39% | 1111/2633 | 42% | 40% to 44% | 2579/6837 | 38% | 37% to 39% |
Exact binomial confidence intervals have been calculated for all data.
*NHS Direct self sampling initiated on 28 May 2009.
†Results from self obtained samples are by week of self swab.
‡Clinical samples from suspect cases of swine flu were tested by Health Protection Agency regional laboratory and are shown by week of swab.