Literature DB >> 19704914

Nonequilibrium separation of short DNA using nanoslit arrays.

Elizabeth A Strychalski, Henry W Lau, Lynden A Archer.   

Abstract

A nonequilibrium regime of size-based separation was observed experimentally for double-stranded deoxyribonucleic acid (DNA) molecules with lengths below 1 kbp moving electrokinetically through nanofluidic nanoslit arrays. The breakdown of Ogston sieving was supplanted at higher electric fields to recover rapid separation with a reversed elution order and elution times one to two orders of magnitude faster than with Ogston sieving at lower fields. A simple kinetic model describes the experimental results.

Year:  2009        PMID: 19704914      PMCID: PMC2730705          DOI: 10.1063/1.3183953

Source DB:  PubMed          Journal:  J Appl Phys        ISSN: 0021-8979            Impact factor:   2.546


  15 in total

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Authors:  J Han; H G Craighead
Journal:  Science       Date:  2000-05-12       Impact factor: 47.728

2.  Mechanisms of DNA separation in entropic trap arrays: a Brownian dynamics simulation.

Authors:  Martin Streek; Friederike Schmid; Thanh Tu Duong; Alexandra Ros
Journal:  J Biotechnol       Date:  2004-08-26       Impact factor: 3.307

3.  Comprehensive interpretation of gel electrophoresis data.

Authors:  Chongli Yuan; Elizabeth Rhoades; Daniel M Heuer; Sourav Saha; Xiong Wen Lou; Lynden A Archer
Journal:  Anal Chem       Date:  2006-09-01       Impact factor: 6.986

Review 4.  Nanofluidic structures for single biomolecule fluorescent detection.

Authors:  J T Mannion; H G Craighead
Journal:  Biopolymers       Date:  2007-02-05       Impact factor: 2.505

5.  A patterned anisotropic nanofluidic sieving structure for continuous-flow separation of DNA and proteins.

Authors:  Jianping Fu; Reto B Schoch; Anna L Stevens; Steven R Tannenbaum; Jongyoon Han
Journal:  Nat Nanotechnol       Date:  2007-02       Impact factor: 39.213

6.  Estimating the persistence length of a worm-like chain molecule from force-extension measurements.

Authors:  C Bouchiat; M D Wang; J Allemand; T Strick; S M Block; V Croquette
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7.  Non-planar nanofluidic devices for single molecule analysis fabricated using nanoglassblowing.

Authors:  Elizabeth A Strychalski; Samuel M Stavis; Harold G Craighead
Journal:  Nanotechnology       Date:  2008-06-17       Impact factor: 3.874

8.  Free-solution oligonucleotide separation in nanoscale channels.

Authors:  Sumita Pennathur; Fabio Baldessari; Juan G Santiago; Michael G Kattah; Jonathan B Steinman; Paul J Utz
Journal:  Anal Chem       Date:  2007-09-21       Impact factor: 6.986

9.  DNA and buffers: the hidden danger of complex formation.

Authors:  N C Stellwagen; C Gelfi; P G Righetti
Journal:  Biopolymers       Date:  2000-08       Impact factor: 2.505

10.  The free solution mobility of DNA.

Authors:  N C Stellwagen; C Gelfi; P G Righetti
Journal:  Biopolymers       Date:  1997-11       Impact factor: 2.505

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  6 in total

1.  Wafer-scale fabrication of high-aspect ratio nanochannels based on edge-lithography technique.

Authors:  Quan Xie; Qing Zhou; Fei Xie; Jianming Sang; Wei Wang; Haixia Alice Zhang; Wengang Wu; Zhihong Li
Journal:  Biomicrofluidics       Date:  2012-02-09       Impact factor: 2.800

2.  Standalone interferometry-based calibration of convex lens-induced confinement microscopy with nanoscale accuracy.

Authors:  Gregory T Morrin; Daniel F Kienle; Daniel K Schwartz
Journal:  Analyst       Date:  2019-04-08       Impact factor: 4.616

Review 3.  Beyond gel electrophoresis: microfluidic separations, fluorescence burst analysis, and DNA stretching.

Authors:  Kevin D Dorfman; Scott B King; Daniel W Olson; Joel D P Thomas; Douglas R Tree
Journal:  Chem Rev       Date:  2012-11-12       Impact factor: 60.622

4.  Electrokinetically-driven transport of DNA through focused ion beam milled nanofluidic channels.

Authors:  Laurent D Menard; J Michael Ramsey
Journal:  Anal Chem       Date:  2012-12-24       Impact factor: 6.986

5.  Ratchet nanofiltration of DNA.

Authors:  Joel D P Thomas; Mark N Joswiak; Daniel W Olson; Sung-Gyu Park; Kevin D Dorfman
Journal:  Lab Chip       Date:  2013-09-21       Impact factor: 6.799

6.  A device for performing lateral conductance measurements on individual double-stranded DNA molecules.

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Journal:  ACS Nano       Date:  2012-09-17       Impact factor: 15.881

  6 in total

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