Literature DB >> 19704789

The functional domain grouping of microtubule associated proteins.

Katherine H Fisher1, Charlotte M Deane, James G Wakefield.   

Abstract

Microtubules (MTs), which play crucial roles in normal cell function, are regulated by MT associated proteins (MAPs). Using a combinatorial approach that includes biochemistry, proteomics and bioinformatics, we have recently identified 270 putative MAPs from Drosophila embryos and characterized some of those required for correct progression through mitosis. Here we identify functional groups of these MAPs using a reciprocal hits sequence alignment technique and assign InterPro functional domains to 28 previously uncharacterized proteins. This approach gives insight into the potential functions of MAPs and how their roles may affect MTs.

Entities:  

Keywords:  Drosophila; MAP; alignment; domain; microtubule

Year:  2008        PMID: 19704789      PMCID: PMC2633798          DOI: 10.4161/cib.1.1.6795

Source DB:  PubMed          Journal:  Commun Integr Biol        ISSN: 1942-0889


  28 in total

Review 1.  WD-repeat proteins: structure characteristics, biological function, and their involvement in human diseases.

Authors:  D Li; R Roberts
Journal:  Cell Mol Life Sci       Date:  2001-12       Impact factor: 9.261

2.  Regulation of microtubule assembly and organization in mitosis by the AAA+ ATPase Pontin.

Authors:  Daniel Ducat; Shin-Ichi Kawaguchi; Hongbin Liu; John R Yates; Yixian Zheng
Journal:  Mol Biol Cell       Date:  2008-05-07       Impact factor: 4.138

3.  Mass spectrometric analysis of microtubule co-sedimented proteins from rat brain.

Authors:  Tatsuhiko Sakamoto; Akiyoshi Uezu; Shinya Kawauchi; Takuya Kuramoto; Koji Makino; Kazuaki Umeda; Norie Araki; Hideo Baba; Hiroyuki Nakanishi
Journal:  Genes Cells       Date:  2008-04       Impact factor: 1.891

4.  EB1 is essential during Drosophila development and plays a crucial role in the integrity of chordotonal mechanosensory organs.

Authors:  Sarah L Elliott; C Fiona Cullen; Nicola Wrobel; Maurice J Kernan; Hiroyuki Ohkura
Journal:  Mol Biol Cell       Date:  2004-12-09       Impact factor: 4.138

5.  Annotation transfer between genomes: protein-protein interologs and protein-DNA regulogs.

Authors:  Haiyuan Yu; Nicholas M Luscombe; Hao Xin Lu; Xiaowei Zhu; Yu Xia; Jing-Dong J Han; Nicolas Bertin; Sambath Chung; Marc Vidal; Mark Gerstein
Journal:  Genome Res       Date:  2004-06       Impact factor: 9.043

6.  Identification of six Tcp-1-related genes encoding divergent subunits of the TCP-1-containing chaperonin.

Authors:  H Kubota; G Hynes; A Carne; A Ashworth; K Willison
Journal:  Curr Biol       Date:  1994-02-01       Impact factor: 10.834

7.  Pfam: clans, web tools and services.

Authors:  Robert D Finn; Jaina Mistry; Benjamin Schuster-Böckler; Sam Griffiths-Jones; Volker Hollich; Timo Lassmann; Simon Moxon; Mhairi Marshall; Ajay Khanna; Richard Durbin; Sean R Eddy; Erik L L Sonnhammer; Alex Bateman
Journal:  Nucleic Acids Res       Date:  2006-01-01       Impact factor: 16.971

Review 8.  Flying through the drosophila cytoskeletal genome.

Authors:  L S Goldstein; S Gunawardena
Journal:  J Cell Biol       Date:  2000-07-24       Impact factor: 10.539

9.  Identification of microtubule-associated proteins in the centrosome, spindle, and kinetochore of the early Drosophila embryo.

Authors:  D R Kellogg; C M Field; B M Alberts
Journal:  J Cell Biol       Date:  1989-12       Impact factor: 10.539

10.  A role for regulated binding of p150(Glued) to microtubule plus ends in organelle transport.

Authors:  Patricia S Vaughan; Pedro Miura; Matthew Henderson; Belinda Byrne; Kevin T Vaughan
Journal:  J Cell Biol       Date:  2002-07-15       Impact factor: 10.539

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  1 in total

1.  PKD3 deficiency causes alterations in microtubule dynamics during the cell cycle.

Authors:  Tianzhou Zhang; Ursula Braun; Michael Leitges
Journal:  Cell Cycle       Date:  2016-05-31       Impact factor: 4.534

  1 in total

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