Literature DB >> 19703900

Functional complementation in yeast allows molecular characterization of missense argininosuccinate lyase mutations.

Eva Trevisson1, Alberto Burlina, Mara Doimo, Vanessa Pertegato, Alberto Casarin, Luca Cesaro, Placido Navas, Giuseppe Basso, Geppo Sartori, Leonardo Salviati.   

Abstract

Deficiency of argininosuccinate lyase (ASL) causes argininosuccinic aciduria, an urea cycle defect that may present with a severe neonatal onset form or with a late onset phenotype. To date phenotype-genotype correlations are still not clear because biochemical assays of ASL activity correlate poorly with clinical severity in patients. We employed a yeast-based functional complementation assay to assess the pathogenicity of 12 missense ASL mutations, to establish genotype-phenotype correlations, and to screen for intragenic complementation. Rather than determining ASL enzyme activity directly, we have measured the growth rate in arginine-free medium of a yeast ASL(null) strain transformed with individual mutant ASL alleles. Individual haploid strains were also mated to obtain diploid, "compound heterozygous" yeast. We show that the late onset phenotypes arise in patients because they harbor individual alleles retaining high residual enzymatic activity or because of intragenic complementation among different mutated alleles. In these cases complementation occurs because in the hybrid tetrameric enzyme at least one active site without mutations can be formed or because the differently mutated alleles can stabilize each other, resulting in partial recovery of enzymatic activity. Functional complementation in yeast is simple and reproducible and allows the analysis of large numbers of mutant alleles. Moreover, it can be easily adapted for the analysis of mutations in other genes involved in urea cycle disorders.

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Year:  2009        PMID: 19703900      PMCID: PMC2781438          DOI: 10.1074/jbc.M109.050195

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  22 in total

1.  Two novel mutations (E86A, R113W) in argininosuccinate lyase deficiency and evidence for highly variable splicing of the human argininosuccinate lyase gene.

Authors:  M Linnebank; A Homberger; B Rapp; C Winter; T Marquardt; E Harms; H G Koch
Journal:  J Inherit Metab Dis       Date:  2000-06       Impact factor: 4.982

2.  Yeast transformation by the LiAc/SS Carrier DNA/PEG method.

Authors:  R Daniel Gietz; Robin A Woods
Journal:  Methods Mol Biol       Date:  2006

Review 3.  Inborn errors of metabolism: the flux from Mendelian to complex diseases.

Authors:  Brendan Lanpher; Nicola Brunetti-Pierri; Brendan Lee
Journal:  Nat Rev Genet       Date:  2006-06       Impact factor: 53.242

4.  Intragenic complementation at the human argininosuccinate lyase locus. Identification of the major complementing alleles.

Authors:  D C Walker; J Christodoulou; H J Craig; L R Simard; L Ploder; P L Howell; R R McInnes
Journal:  J Biol Chem       Date:  1997-03-07       Impact factor: 5.157

5.  Three-dimensional structure of the argininosuccinate lyase frequently complementing allele Q286R.

Authors:  L M Sampaleanu; F Vallée; G D Thompson; P L Howell
Journal:  Biochemistry       Date:  2001-12-25       Impact factor: 3.162

6.  Structural model of a malonyl-CoA-binding site of carnitine octanoyltransferase and carnitine palmitoyltransferase I: mutational analysis of a malonyl-CoA affinity domain.

Authors:  Montserrat Morillas; Paulino Gómez-Puertas; Blanca Rubí; Josep Clotet; Joaquín Ariño; Alfonso Valencia; Fausto G Hegardt; Dolors Serra; Guillermina Asins
Journal:  J Biol Chem       Date:  2002-01-14       Impact factor: 5.157

7.  Argininosuccinate lyase (ASL) deficiency: mutation analysis in 27 patients and a completed structure of the human ASL gene.

Authors:  Michael Linnebank; Eva Tschiedel; Johannes Häberle; Anja Linnebank; Holger Willenbring; Wim J Kleijer; Hans G Koch
Journal:  Hum Genet       Date:  2002-08-14       Impact factor: 4.132

8.  Prenyldiphosphate synthase, subunit 1 (PDSS1) and OH-benzoate polyprenyltransferase (COQ2) mutations in ubiquinone deficiency and oxidative phosphorylation disorders.

Authors:  Julie Mollet; Irina Giurgea; Dimitri Schlemmer; Gustav Dallner; Dominique Chretien; Agnès Delahodde; Delphine Bacq; Pascale de Lonlay; Arnold Munnich; Agnès Rötig
Journal:  J Clin Invest       Date:  2007-03       Impact factor: 14.808

9.  A mutation in the human heme A:farnesyltransferase gene (COX10 ) causes cytochrome c oxidase deficiency.

Authors:  I Valnot; J C von Kleist-Retzow; A Barrientos; M Gorbatyuk; J W Taanman; B Mehaye; P Rustin; A Tzagoloff; A Munnich; A Rötig
Journal:  Hum Mol Genet       Date:  2000-05-01       Impact factor: 6.150

10.  Mutation D104G in ANT1 gene: complementation study in Saccharomyces cerevisiae as a model system.

Authors:  Tiziana Lodi; Claudio Bove; Flavia Fontanesi; Anna Maria Viola; Iliana Ferrero
Journal:  Biochem Biophys Res Commun       Date:  2006-01-19       Impact factor: 3.575

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  19 in total

1.  Yeast complementation is sufficiently sensitive to detect the residual activity of ASL alleles associated with mild forms of argininosuccinic aciduria.

Authors:  Mara Doimo; Eva Trevisson; Geppo Sartori; Alberto Burlina; Leonardo Salviati
Journal:  J Inherit Metab Dis       Date:  2012-01-10       Impact factor: 4.982

2.  MCM5: a new actor in the link between DNA replication and Meier-Gorlin syndrome.

Authors:  Annalisa Vetro; Salvatore Savasta; Annalisa Russo Raucci; Cristina Cerqua; Geppo Sartori; Ivan Limongelli; Antonella Forlino; Silvia Maruelli; Paola Perucca; Debora Vergani; Giuliano Mazzini; Andrea Mattevi; Lucia Anna Stivala; Leonardo Salviati; Orsetta Zuffardi
Journal:  Eur J Hum Genet       Date:  2017-02-15       Impact factor: 4.246

3.  A yeast-based complementation assay elucidates the functional impact of 200 missense variants in human PSAT1.

Authors:  Amy Sirr; Russell S Lo; Gareth A Cromie; Adrian C Scott; Julee Ashmead; Mirutse Heyesus; Aimée M Dudley
Journal:  J Inherit Metab Dis       Date:  2020-02-27       Impact factor: 4.982

4.  Haploinsufficiency of COQ4 causes coenzyme Q10 deficiency.

Authors:  Leonardo Salviati; Eva Trevisson; Maria Angeles Rodriguez Hernandez; Alberto Casarin; Vanessa Pertegato; Mara Doimo; Matteo Cassina; Caterina Agosto; Maria Andrea Desbats; Geppo Sartori; Sabrina Sacconi; Luigi Memo; Orsetta Zuffardi; Rafael Artuch; Catarina Quinzii; Salvatore Dimauro; Michio Hirano; Carlos Santos-Ocaña; Plácido Navas
Journal:  J Med Genet       Date:  2012-03       Impact factor: 6.318

5.  Requirement of argininosuccinate lyase for systemic nitric oxide production.

Authors:  Ayelet Erez; Sandesh C S Nagamani; Oleg A Shchelochkov; Muralidhar H Premkumar; Philippe M Campeau; Yuqing Chen; Harsha K Garg; Li Li; Asad Mian; Terry K Bertin; Jennifer O Black; Heng Zeng; Yaoping Tang; Anilkumar K Reddy; Marshall Summar; William E O'Brien; David G Harrison; William E Mitch; Juan C Marini; Judy L Aschner; Nathan S Bryan; Brendan Lee
Journal:  Nat Med       Date:  2011-11-13       Impact factor: 53.440

6.  Unstable argininosuccinate lyase in variant forms of the urea cycle disorder argininosuccinic aciduria.

Authors:  Liyan Hu; Amit V Pandey; Cécile Balmer; Sandra Eggimann; Véronique Rüfenacht; Jean-Marc Nuoffer; Johannes Häberle
Journal:  J Inherit Metab Dis       Date:  2015-03-17       Impact factor: 4.982

Review 7.  Optimizing therapy for argininosuccinic aciduria.

Authors:  Sandesh C S Nagamani; Brendan Lee; Ayelet Erez
Journal:  Mol Genet Metab       Date:  2012-07-20       Impact factor: 4.797

8.  Understanding the role of argininosuccinate lyase transcript variants in the clinical and biochemical variability of the urea cycle disorder argininosuccinic aciduria.

Authors:  Liyan Hu; Amit V Pandey; Sandra Eggimann; Véronique Rüfenacht; Dorothea Möslinger; Jean-Marc Nuoffer; Johannes Häberle
Journal:  J Biol Chem       Date:  2013-10-17       Impact factor: 5.157

9.  Heterologous Expression in Yeast of Human Ornithine Carriers ORNT1 and ORNT2 and of ORNT1 Alleles Implicated in HHH Syndrome in Humans.

Authors:  Mara Doimo; Raffaele Lopreiato; Valentina Basso; Raissa Bortolotto; Alessandra Tessa; Filippo M Santorelli; Eva Trevisson; Leonardo Salviati
Journal:  JIMD Rep       Date:  2015-11-21

Review 10.  Argininosuccinate lyase deficiency-argininosuccinic aciduria and beyond.

Authors:  Ayelet Erez; Sandesh C Sreenath Nagamani; Brendan Lee
Journal:  Am J Med Genet C Semin Med Genet       Date:  2011-02-10       Impact factor: 3.908

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