Literature DB >> 19700525

Allosteric regulation of glucosamine-6-phosphate deaminase (NagB) and growth of Escherichia coli on glucosamine.

Laura I Alvarez-Añorve1, Ismael Bustos-Jaimes, Mario L Calcagno, Jacqueline Plumbridge.   

Abstract

Growth on N-acetylglucosamine (GlcNAc) produces intracellular N-acetylglucosamine-6-phosphate (GlcNAc6P), which affects the regulation of the catabolism of amino sugars in Escherichia coli in two ways. First, GlcNAc6P is the inducing signal for the NagC repressor, and thus it increases the expression of the enzymes of the nagE-nagBACD operon. Second, it is the allosteric activator of glucosamine-6P (GlcN6P) deaminase, NagB, and thus increases the catalytic capacity of this key enzyme in the metabolism of amino sugars. We showed previously that both the level of expression of the nagB gene and the transport of glucosamine were limiting the growth rate on GlcN (L. I. Alvarez-Añorve et al., J. Bacteriol. 187:2974-2982, 2005). We were unable to conclude if the lack of allosteric activation of wild-type NagB was also contributing to the slower growth rate on GlcN. Using a single-copy plasmid, with a constitutive promoter, we have separated the effects of GlcNAc6P on the NagB protein level and on deaminase activity. We show that over a range of intracellular NagB concentrations it is the quantity of the substrate, GlcN6P, which is limiting growth rather than the concentration of the allosteric activator, GlcNAc6P. On the other hand, the F174A mutant of NagB, which requires higher concentrations of GlcNAc6P for activity in vitro, grew better on GlcN in the presence of GlcNAc6P. However, wild-type NagB behaves as if it is already fully allosterically activated during growth on GlcN, and we present evidence suggesting that sufficient GlcNAc6P for allosteric activation is derived from the recycling of peptidoglycan.

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Year:  2009        PMID: 19700525      PMCID: PMC2753035          DOI: 10.1128/JB.00633-09

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  33 in total

Review 1.  Regulation of gene expression in the PTS in Escherichia coli: the role and interactions of Mlc.

Authors:  Jacqueline Plumbridge
Journal:  Curr Opin Microbiol       Date:  2002-04       Impact factor: 7.934

2.  Sequence of the nagBACD operon in Escherichia coli K12 and pattern of transcription within the nag regulon.

Authors:  J A Plumbridge
Journal:  Mol Microbiol       Date:  1989-04       Impact factor: 3.501

3.  One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products.

Authors:  K A Datsenko; B L Wanner
Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-06       Impact factor: 11.205

4.  Allosteric transition and substrate binding are entropy-driven in glucosamine-6-phosphate deaminase from Escherichia coli.

Authors:  I Bustos-Jaimes; M L Calcagno
Journal:  Arch Biochem Biophys       Date:  2001-10-15       Impact factor: 4.013

5.  Effect of amino sugars on catabolite repression in Escherichia coli.

Authors:  W J Dobrogosz
Journal:  J Bacteriol       Date:  1968-02       Impact factor: 3.490

6.  Control of amino sugar metabolism in Escherichia coli and isolation of mutants unable to degrade amino sugars.

Authors:  R J White
Journal:  Biochem J       Date:  1968-02       Impact factor: 3.857

7.  Purification, molecular and kinetic properties of glucosamine-6-phosphate isomerase (deaminase) from Escherichia coli.

Authors:  M Calcagno; P J Campos; G Mulliert; J Suástegui
Journal:  Biochim Biophys Acta       Date:  1984-06-14

8.  An alternative route for recycling of N-acetylglucosamine from peptidoglycan involves the N-acetylglucosamine phosphotransferase system in Escherichia coli.

Authors:  Jacqueline Plumbridge
Journal:  J Bacteriol       Date:  2009-07-17       Impact factor: 3.490

9.  Two mammalian glucosamine-6-phosphate deaminases: a structural and genetic study.

Authors:  Rodrigo Arreola; Brenda Valderrama; Maria L Morante; Eduardo Horjales
Journal:  FEBS Lett       Date:  2003-09-11       Impact factor: 4.124

10.  On the role of the conformational flexibility of the active-site lid on the allosteric kinetics of glucosamine-6-phosphate deaminase.

Authors:  Ismael Bustos-Jaimes; Alejandro Sosa-Peinado; Enrique Rudiño-Piñera; Eduardo Horjales; Mario L Calcagno
Journal:  J Mol Biol       Date:  2002-05-24       Impact factor: 5.469

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  11 in total

1.  The phosphocarrier protein HPr of the bacterial phosphotransferase system globally regulates energy metabolism by directly interacting with multiple enzymes in Escherichia coli.

Authors:  Irina A Rodionova; Zhongge Zhang; Jitender Mehla; Norman Goodacre; Mohan Babu; Andrew Emili; Peter Uetz; Milton H Saier
Journal:  J Biol Chem       Date:  2017-06-20       Impact factor: 5.157

2.  Enhanced drought tolerance in Arabidopsis via genetic manipulation aimed at the reduction of glucosamine-induced ROS generation.

Authors:  Seung Hee Chu; Ha-na Noh; Sooah Kim; Kyoung Heon Kim; Suk-Whan Hong; Hojoung Lee
Journal:  Plant Mol Biol       Date:  2010-09-28       Impact factor: 4.076

3.  The Nitrogen Regulatory PII Protein (GlnB) and N-Acetylglucosamine 6-Phosphate Epimerase (NanE) Allosterically Activate Glucosamine 6-Phosphate Deaminase (NagB) in Escherichia coli.

Authors:  Irina A Rodionova; Norman Goodacre; Mohan Babu; Andrew Emili; Peter Uetz; Milton H Saier
Journal:  J Bacteriol       Date:  2018-02-07       Impact factor: 3.490

4.  Uptake and metabolism of N-acetylglucosamine and glucosamine by Streptococcus mutans.

Authors:  Zachary D Moye; Robert A Burne; Lin Zeng
Journal:  Appl Environ Microbiol       Date:  2014-06-13       Impact factor: 4.792

5.  The N-acetyl-D-glucosamine repressor NagC of Vibrio fischeri facilitates colonization of Euprymna scolopes.

Authors:  Tim Miyashiro; Will Klein; Dane Oehlert; Xiaodan Cao; Julia Schwartzman; Edward G Ruby
Journal:  Mol Microbiol       Date:  2011-10-12       Impact factor: 3.501

6.  NagR Differentially Regulates the Expression of the glmS and nagAB Genes Required for Amino Sugar Metabolism by Streptococcus mutans.

Authors:  Lin Zeng; Robert A Burne
Journal:  J Bacteriol       Date:  2015-08-31       Impact factor: 3.490

7.  Allosteric Activation of Escherichia coli Glucosamine-6-Phosphate Deaminase (NagB) In Vivo Justified by Intracellular Amino Sugar Metabolite Concentrations.

Authors:  Laura I Álvarez-Añorve; Isabelle Gaugué; Hannes Link; Jorge Marcos-Viquez; Dana M Díaz-Jiménez; Sergio Zonszein; Ismael Bustos-Jaimes; Isabelle Schmitz-Afonso; Mario L Calcagno; Jacqueline Plumbridge
Journal:  J Bacteriol       Date:  2016-05-13       Impact factor: 3.490

8.  GlmS and NagB regulate amino sugar metabolism in opposing directions and affect Streptococcus mutans virulence.

Authors:  Miki Kawada-Matsuo; Yusuke Mazda; Yuichi Oogai; Mikihito Kajiya; Toshihisa Kawai; Sakuo Yamada; Shouichi Miyawaki; Takahiko Oho; Hitoshi Komatsuzawa
Journal:  PLoS One       Date:  2012-03-16       Impact factor: 3.240

9.  N-acetylglucosamine-Mediated Expression of nagA and nagB in Streptococcus pneumoniae.

Authors:  Muhammad Afzal; Sulman Shafeeq; Irfan Manzoor; Birgitta Henriques-Normark; Oscar P Kuipers
Journal:  Front Cell Infect Microbiol       Date:  2016-11-16       Impact factor: 5.293

10.  The use of amino sugars by Bacillus subtilis: presence of a unique operon for the catabolism of glucosamine.

Authors:  Isabelle Gaugué; Jacques Oberto; Harald Putzer; Jacqueline Plumbridge
Journal:  PLoS One       Date:  2013-05-08       Impact factor: 3.240

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