Literature DB >> 19695992

Detecting space-time alternating biological signals close to the bifurcation point.

Zhiheng Jia1, Harold Bien, Emilia Entcheva.   

Abstract

Time-alternating biological signals, i.e., alternans, arise in variety of physiological states marked by dynamic instabilities, e.g., period doubling. Normally, a sequence of large-small-large transients, they can exhibit variable patterns over time and space, including spatial discordance. Capture of the early formation of such alternating regions is challenging because of the spatiotemporal similarities between noise and the small-amplitude alternating signals close to the bifurcation point. We present a new approach for automatic detection of alternating signals in large noisy spatiotemporal datasets by exploiting quantitative measures of alternans evolution, e.g., temporal persistence, and by preserving phase information. The technique specifically targets low amplitude, relatively short alternating sequences and is validated by combinatorics-derived probabilities and empirical datasets with white noise. Using high-resolution optical mapping in live cardiomyocyte networks, exhibiting calcium alternans, we reveal for the first time early fine-scale alternans, close to the noise level, which are linked to the later formation of larger regions and evolution of spatially discordant alternans. This robust method aims at quantification and better understanding of the onset of cardiac arrhythmias and can be applied to general analysis of space-time alternating signals, including the vicinity of the bifurcation point.

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Year:  2009        PMID: 19695992      PMCID: PMC3153073          DOI: 10.1109/TBME.2009.2028652

Source DB:  PubMed          Journal:  IEEE Trans Biomed Eng        ISSN: 0018-9294            Impact factor:   4.538


  22 in total

1.  Mechanisms of discordant alternans and induction of reentry in simulated cardiac tissue.

Authors:  Z Qu; A Garfinkel; P S Chen; J N Weiss
Journal:  Circulation       Date:  2000-10-03       Impact factor: 29.690

2.  Calcium instabilities in mammalian cardiomyocyte networks.

Authors:  Harold Bien; Lihong Yin; Emilia Entcheva
Journal:  Biophys J       Date:  2006-01-06       Impact factor: 4.033

3.  Complex-periodic spiral waves in confluent cardiac cell cultures induced by localized inhomogeneities.

Authors:  Seong-Min Hwang; Tae Yun Kim; Kyoung J Lee
Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-28       Impact factor: 11.205

4.  Spatially discordant alternans in cardiac tissue: role of calcium cycling.

Authors:  Daisuke Sato; Yohannes Shiferaw; Alan Garfinkel; James N Weiss; Zhilin Qu; Alain Karma
Journal:  Circ Res       Date:  2006-08-10       Impact factor: 17.367

Review 5.  From pulsus to pulseless: the saga of cardiac alternans.

Authors:  James N Weiss; Alain Karma; Yohannes Shiferaw; Peng-Sheng Chen; Alan Garfinkel; Zhilin Qu
Journal:  Circ Res       Date:  2006-05-26       Impact factor: 17.367

6.  Period-doubling bifurcation to alternans in paced cardiac tissue: crossover from smooth to border-collision characteristics.

Authors:  Carolyn M Berger; Xiaopeng Zhao; David G Schaeffer; Hana M Dobrovolny; Wanda Krassowska; Daniel J Gauthier
Journal:  Phys Rev Lett       Date:  2007-07-30       Impact factor: 9.161

7.  Spatially discordant alternans in cardiomyocyte monolayers.

Authors:  Carlos de Diego; Rakesh K Pai; Amish S Dave; Adam Lynch; Mya Thu; Fuhua Chen; Lai-Hua Xie; James N Weiss; Miguel Valderrábano
Journal:  Am J Physiol Heart Circ Physiol       Date:  2008-01-25       Impact factor: 4.733

Review 8.  T-wave alternans: marker, mechanism, and methodology for predicting sudden cardiac death.

Authors:  Quan Pham; Kara J Quan; David S Rosenbaum
Journal:  J Electrocardiol       Date:  2003       Impact factor: 1.438

9.  A sensitive algorithm for automatic detection of space-time alternating signals in cardiac tissue.

Authors:  Zhiheng Jia; Harold Bien; Emilia Entcheva
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2008

10.  Current developments in microvolt T-wave alternans.

Authors:  Beata Sredniawa; Agata Musialik-Lydka; Jacek Kowalczyk; Zbigniew Kalarus
Journal:  Indian Pacing Electrophysiol J       Date:  2006-10-01
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  3 in total

1.  Complex and rate-dependent beat-to-beat variations in Ca2+ transients of canine Purkinje cells.

Authors:  Young-Seon Lee; Wen Dun; Penelope A Boyden; Eric A Sobie
Journal:  J Mol Cell Cardiol       Date:  2011-01-11       Impact factor: 5.000

2.  Cardiac cellular coupling and the spread of early instabilities in intracellular Ca2+.

Authors:  Zhiheng Jia; Harold Bien; Yohannes Shiferaw; Emilia Entcheva
Journal:  Biophys J       Date:  2012-03-20       Impact factor: 4.033

3.  A class of Monte-Carlo-based statistical algorithms for efficient detection of repolarization alternans.

Authors:  Shahriar Iravanian; Uche B Kanu; David J Christini
Journal:  IEEE Trans Biomed Eng       Date:  2012-04-03       Impact factor: 4.538

  3 in total

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