Literature DB >> 19694651

A SNP/microsatellite genetic linkage map of the Atlantic cod (Gadus morhua).

T Moen1, M Delghandi, M S Wesmajervi, J-I Westgaard, K T Fjalestad.   

Abstract

A first genetic linkage map of the Atlantic cod (Gadus morhua) was produced, based on segregation data from 12 full-sib families of Norwegian origin. The map contained 174 single nucleotide polymorphism markers and 33 microsatellites, distributed on 25 linkage groups and had a length of 1225 cM. A significant difference in recombination rates between sexes was found, the average ratio of female:male recombination rates being 1.78 +/- 1.62 (SD).

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Year:  2009        PMID： 19694651     DOI： 10.1111/j.1365-2052.2009.01938.x

Source DB:  PubMed          Journal:  Anim Genet        ISSN： 0268-9146            Impact factor:   3.169


  10 in total

1.  Characterization of 40 single nucleotide polymorphism (SNP) via Tm-shift assay in the mud crab (Scylla paramamosain).

Authors:  Nana Feng; Hongyu Ma; Chunyan Ma; Zhen Xu; Shujuan Li; Wei Jiang; Yuexing Liu; Lingbo Ma
Journal:  Mol Biol Rep       Date:  2014-05-28       Impact factor: 2.316

2.  The Significance of PCR Primer Design in Genetic Diversity Studies: Exemplified by Recent Research into the Genetic Structure of Marine Species.

Authors:  Madjid Delghandi; Marit Pedersen Delghandi; Stephen Goddard
Journal:  Methods Mol Biol       Date:  2022

3.  Development of a SNP resource and a genetic linkage map for Atlantic cod (Gadus morhua).

Authors:  Sophie Hubert; Brent Higgins; Tudor Borza; Sharen Bowman
Journal:  BMC Genomics       Date:  2010-03-22       Impact factor: 3.969

4.  Genomic organization and gene expression of the multiple globins in Atlantic cod: conservation of globin-flanking genes in chordates infers the origin of the vertebrate globin clusters.

Authors:  Ola F Wetten; Alexander J Nederbragt; Robert C Wilson; Kjetill S Jakobsen; Rolf B Edvardsen; Øivind Andersen
Journal:  BMC Evol Biol       Date:  2010-10-20       Impact factor: 3.260

5.  Integrating the markers Pan I and haemoglobin with the genetic linkage map of Atlantic cod (Gadus morhua).

Authors:  Tudor Borza; Brent Higgins; Gary Simpson; Sharen Bowman
Journal:  BMC Res Notes       Date:  2010-10-15

6.  Polymorphism, selection and tandem duplication of transferrin genes in Atlantic cod (Gadus morhua)--conserved synteny between fish monolobal and tetrapod bilobal transferrin loci.

Authors:  Øivind Andersen; Maria Cristina De Rosa; Davide Pirolli; Ave Tooming-Klunderud; Petra E Petersen; Carl André
Journal:  BMC Genet       Date:  2011-05-25       Impact factor: 2.797

7.  A genetic linkage map of sole (Solea solea): a tool for evolutionary and comparative analyses of exploited (flat)fishes.

Authors:  Eveline Diopere; Gregory E Maes; Hans Komen; Filip A M Volckaert; Martien A M Groenen
Journal:  PLoS One       Date:  2014-12-26       Impact factor: 3.240

8.  A Nanopore Based Chromosome-Level Assembly Representing Atlantic Cod from the Celtic Sea.

Authors:  Tina Graceline Kirubakaran; Øivind Andersen; Michel Moser; Mariann Árnyasi; Philip McGinnity; Sigbjørn Lien; Matthew Kent
Journal:  G3 (Bethesda)       Date:  2020-09-02       Impact factor: 3.154

9.  Nucleotide variation and balancing selection at the Ckma gene in Atlantic cod: analysis with multiple merger coalescent models.

Authors:  Einar Árnason; Katrín Halldórsdóttir
Journal:  PeerJ       Date:  2015-02-24       Impact factor: 2.984

10.  SNP discovery in European anchovy (Engraulis encrasicolus, L) by high-throughput transcriptome and genome sequencing.

Authors:  Iratxe Montes; Darrell Conklin; Aitor Albaina; Simon Creer; Gary R Carvalho; María Santos; Andone Estonba
Journal:  PLoS One       Date:  2013-08-01       Impact factor: 3.240
  10 in total

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