Literature DB >> 19693704

(1)H, (13)C and (15)N resonance assignments of a ribonucleoprotein complex consisting of Prp24-RRM2 bound to a fragment of U6 RNA.

Stephen Martin-Tumasz1, Samuel E Butcher.   

Abstract

Saccharomyces cerevisiae Prp24 is an essential RNA binding protein involved in pre-mRNA splicing. Nearly complete backbone and side chain resonance assignments have been obtained for the second RNA recognition motif (RRM) of Prp24 (RRM2, residues M114-E197) both in isolation and bound to a six nucleotide fragment of U6 RNA (AGAGAU). In addition, nearly complete backbone assignments have been made for a Prp24 construct spanning the second and third RRMs (RRM23, residues M114-K290), both free and bound to AGAGAU.

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Year:  2009        PMID: 19693704      PMCID: PMC2972308          DOI: 10.1007/s12104-009-9181-5

Source DB:  PubMed          Journal:  Biomol NMR Assign        ISSN: 1874-270X            Impact factor:   0.746


  9 in total

1.  Sequence-dependent correction of random coil NMR chemical shifts.

Authors:  S Schwarzinger; G J Kroon; T R Foss; J Chung; P E Wright; H J Dyson
Journal:  J Am Chem Soc       Date:  2001-04-04       Impact factor: 15.419

2.  RNA structure and RNA-protein interactions in purified yeast U6 snRNPs.

Authors:  Ramazan Karaduman; Patrizia Fabrizio; Klaus Hartmuth; Henning Urlaub; Reinhard Lührmann
Journal:  J Mol Biol       Date:  2005-12-20       Impact factor: 5.469

3.  Suppressors of a U4 snRNA mutation define a novel U6 snRNP protein with RNA-binding motifs.

Authors:  K W Shannon; C Guthrie
Journal:  Genes Dev       Date:  1991-05       Impact factor: 11.361

4.  The N- and C-terminal RNA recognition motifs of splicing factor Prp24 have distinct functions in U6 RNA binding.

Authors:  Sharon S Kwan; David A Brow
Journal:  RNA       Date:  2005-04-05       Impact factor: 4.942

5.  A spliceosomal recycling factor that reanneals U4 and U6 small nuclear ribonucleoprotein particles.

Authors:  P L Raghunathan; C Guthrie
Journal:  Science       Date:  1998-02-06       Impact factor: 47.728

6.  Specificity of Prp24 binding to RNA: a role for Prp24 in the dynamic interaction of U4 and U6 snRNAs.

Authors:  A Ghetti; M Company; J Abelson
Journal:  RNA       Date:  1995-04       Impact factor: 4.942

7.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

8.  Structure and interactions of the first three RNA recognition motifs of splicing factor prp24.

Authors:  Euiyoung Bae; Nicholas J Reiter; Craig A Bingman; Sharon S Kwan; Donghan Lee; George N Phillips; Samuel E Butcher; David A Brow
Journal:  J Mol Biol       Date:  2007-02-07       Impact factor: 5.469

9.  Structure of yeast U6 snRNPs: arrangement of Prp24p and the LSm complex as revealed by electron microscopy.

Authors:  Ramazan Karaduman; Prakash Dube; Holger Stark; Patrizia Fabrizio; Berthold Kastner; Reinhard Lührmann
Journal:  RNA       Date:  2008-10-29       Impact factor: 4.942

  9 in total
  3 in total

1.  Structure and functional implications of a complex containing a segment of U6 RNA bound by a domain of Prp24.

Authors:  Stephen Martin-Tumasz; Nicholas J Reiter; David A Brow; Samuel E Butcher
Journal:  RNA       Date:  2010-02-24       Impact factor: 4.942

2.  A novel occluded RNA recognition motif in Prp24 unwinds the U6 RNA internal stem loop.

Authors:  Stephen Martin-Tumasz; Ashley C Richie; Lawrence J Clos; David A Brow; Samuel E Butcher
Journal:  Nucleic Acids Res       Date:  2011-06-07       Impact factor: 16.971

3.  Thermodynamic examination of pH and magnesium effect on U6 RNA internal loop.

Authors:  Allison A O'Connell; Jared A Hanson; Darryl C McCaskill; Ethan T Moore; Daniel C Lewis; Neena Grover
Journal:  RNA       Date:  2019-09-23       Impact factor: 4.942

  3 in total

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