Literature DB >> 19687136

Removal of the bloom syndrome DNA helicase extends the utility of imprecise transposon excision for making null mutations in Drosophila.

Alice Witsell1, Daniel P Kane, Sarah Rubin, Mitch McVey.   

Abstract

Transposable elements are frequently used in Drosophila melanogaster for imprecise excision screens to delete genes of interest. However, these screens are highly variable in the number and size of deletions that are recovered. Here, we show that conducting excision screens in mus309 mutant flies that lack DmBlm, the Drosophila ortholog of the Bloom syndrome protein, increases the percentage and overall size of flanking deletions recovered after excision of either P or Minos elements.

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Year:  2009        PMID: 19687136      PMCID: PMC2778970          DOI: 10.1534/genetics.109.108472

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  42 in total

1.  A genetic screen for DNA double-strand break repair mutations in Drosophila.

Authors:  Debbie S Wei; Yikang S Rong
Journal:  Genetics       Date:  2007-07-29       Impact factor: 4.562

Review 2.  P-element mutagenesis.

Authors:  Thomas Hummel; Christian Klämbt
Journal:  Methods Mol Biol       Date:  2008

3.  Targeted gene inactivation in zebrafish using engineered zinc-finger nucleases.

Authors:  Xiangdong Meng; Marcus B Noyes; Lihua J Zhu; Nathan D Lawson; Scot A Wolfe
Journal:  Nat Biotechnol       Date:  2008-05-25       Impact factor: 54.908

4.  Gene targeting in Drosophila and Caenorhabditis elegans with zinc-finger nucleases.

Authors:  Dana Carroll; Kelly J Beumer; J Jason Morton; Ana Bozas; Jonathan K Trautman
Journal:  Methods Mol Biol       Date:  2008

5.  A model system for analyzing somatic mutations in Drosophila melanogaster.

Authors:  Ana Maria Garcia; Anastasia Derventzi; Rita Busuttil; R Brent Calder; Ernesto Perez; Linda Chadwell; Martijn E T Dollé; Martha Lundell; Jan Vijg
Journal:  Nat Methods       Date:  2007-04-15       Impact factor: 28.547

6.  piggyBac can bypass DNA synthesis during cut and paste transposition.

Authors:  Rupak Mitra; Jennifer Fain-Thornton; Nancy L Craig
Journal:  EMBO J       Date:  2008-03-20       Impact factor: 11.598

7.  Multiple functions of Drosophila BLM helicase in maintenance of genome stability.

Authors:  Mitch McVey; Sabrina L Andersen; Yuri Broze; Jeff Sekelsky
Journal:  Genetics       Date:  2007-05-16       Impact factor: 4.562

8.  The DrosDel deletion collection: a Drosophila genomewide chromosomal deficiency resource.

Authors:  Edward Ryder; Michael Ashburner; Rosa Bautista-Llacer; Jenny Drummond; Jane Webster; Glynnis Johnson; Terri Morley; Yuk Sang Chan; Fiona Blows; Darin Coulson; Gunter Reuter; Heiko Baisch; Christian Apelt; Andreas Kauk; Thomas Rudolph; Maria Kube; Melanie Klimm; Claudia Nickel; Janos Szidonya; Peter Maróy; Margit Pal; Asa Rasmuson-Lestander; Karin Ekström; Hugo Stocker; Christoph Hugentobler; Ernst Hafen; David Gubb; Gert Pflugfelder; Christian Dorner; Bernard Mechler; Heide Schenkel; Joachim Marhold; Florenci Serras; Montserrat Corominas; Adrià Punset; John Roote; Steven Russell
Journal:  Genetics       Date:  2007-08-24       Impact factor: 4.562

9.  DNA strand displacement, strand annealing and strand swapping by the Drosophila Bloom's syndrome helicase.

Authors:  Brian T Weinert; Donald C Rio
Journal:  Nucleic Acids Res       Date:  2007-02-01       Impact factor: 16.971

10.  Heritable targeted gene disruption in zebrafish using designed zinc-finger nucleases.

Authors:  Yannick Doyon; Jasmine M McCammon; Jeffrey C Miller; Farhoud Faraji; Catherine Ngo; George E Katibah; Rainier Amora; Toby D Hocking; Lei Zhang; Edward J Rebar; Philip D Gregory; Fyodor D Urnov; Sharon L Amacher
Journal:  Nat Biotechnol       Date:  2008-05-25       Impact factor: 54.908

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  10 in total

1.  Identification of Ppk26, a DEG/ENaC Channel Functioning with Ppk1 in a Mutually Dependent Manner to Guide Locomotion Behavior in Drosophila.

Authors:  David A Gorczyca; Susan Younger; Shan Meltzer; Sung Eun Kim; Li Cheng; Wei Song; Hye Young Lee; Lily Yeh Jan; Yuh Nung Jan
Journal:  Cell Rep       Date:  2014-11-06       Impact factor: 9.423

2.  MiMIC: a highly versatile transposon insertion resource for engineering Drosophila melanogaster genes.

Authors:  Koen J T Venken; Karen L Schulze; Nele A Haelterman; Hongling Pan; Yuchun He; Martha Evans-Holm; Joseph W Carlson; Robert W Levis; Allan C Spradling; Roger A Hoskins; Hugo J Bellen
Journal:  Nat Methods       Date:  2011-09       Impact factor: 28.547

3.  Dissection of Nidogen function in Drosophila reveals tissue-specific mechanisms of basement membrane assembly.

Authors:  Jianli Dai; Beatriz Estrada; Sofie Jacobs; Besaiz J Sánchez-Sánchez; Jia Tang; Mengqi Ma; Patricia Magadán-Corpas; José C Pastor-Pareja; María D Martín-Bermudo
Journal:  PLoS Genet       Date:  2018-09-27       Impact factor: 5.917

Review 4.  P Transposable Elements in Drosophila and other Eukaryotic Organisms.

Authors:  Sharmistha Majumdar; Donald C Rio
Journal:  Microbiol Spectr       Date:  2015-04

5.  Genetic manipulation of genes and cells in the nervous system of the fruit fly.

Authors:  Koen J T Venken; Julie H Simpson; Hugo J Bellen
Journal:  Neuron       Date:  2011-10-20       Impact factor: 17.173

6.  Competition between replicative and translesion polymerases during homologous recombination repair in Drosophila.

Authors:  Daniel P Kane; Michael Shusterman; Yikang Rong; Mitch McVey
Journal:  PLoS Genet       Date:  2012-04-19       Impact factor: 5.917

Review 7.  Chemical mutagens, transposons, and transgenes to interrogate gene function in Drosophila melanogaster.

Authors:  Koen J T Venken; Hugo J Bellen
Journal:  Methods       Date:  2014-02-28       Impact factor: 3.608

8.  The Drosophila mojavensis Bari3 transposon: distribution and functional characterization.

Authors:  Antonio Palazzo; Roberta Moschetti; Ruggiero Caizzi; René Massimiliano Marsano
Journal:  Mob DNA       Date:  2014-07-08

9.  dOCRL maintains immune cell quiescence by regulating endosomal traffic.

Authors:  Steven J Del Signore; Sarah A Biber; Katherine S Lehmann; Stephanie R Heimler; Benjamin H Rosenfeld; Tania L Eskin; Sean T Sweeney; Avital A Rodal
Journal:  PLoS Genet       Date:  2017-10-13       Impact factor: 5.917

10.  In vivo bioassay to test the pathogenicity of missense human AIP variants.

Authors:  Elena Daniela Aflorei; Benjamin Klapholz; Chenghao Chen; Serban Radian; Anca Neluta Dragu; Nina Moderau; Chrisostomos Prodromou; Paulo S Ribeiro; Ralf Stanewsky; Márta Korbonits
Journal:  J Med Genet       Date:  2018-04-09       Impact factor: 6.318

  10 in total

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