Literature DB >> 19684026

The interval between Ins2 and Ascl2 is dispensable for imprinting centre function in the murine Beckwith-Wiedemann region.

Louis Lefebvre1, Lynn Mar, Aaron Bogutz, Rosemary Oh-McGinnis, Mohammad A Mandegar, Jana Paderova, Marina Gertsenstein, Jeremy A Squire, Andras Nagy.   

Abstract

Imprinted genes are commonly clustered in domains across the mammalian genome, suggesting a degree of coregulation via long-range coordination of their monoallelic transcription. The distal end of mouse chromosome 7 (Chr 7) contains two clusters of imprinted genes within a approximately 1 Mb domain. This region is conserved on human 11p15.5 where it is implicated in the Beckwith-Wiedemann syndrome. In both species, imprinted regulation requires two critical cis-acting imprinting centres, carrying different germline epigenetic marks and mediating imprinted expression in the proximal and distal sub-domains. The clusters are separated by a region containing the gene for tyrosine hydroxylase (Th) as well as a high density of short repeats and retrotransposons in the mouse. We have used the Cre-loxP recombination system in vivo to engineer an interstitial deletion of this approximately 280-kb intervening region previously proposed to participate in the imprinting mechanism or to act as a boundary between the two sub-domains. The deletion allele, Del(7AI), is silent with respect to epigenetic marking at the two flanking imprinting centres. Reciprocal inheritance of Del(7AI) demonstrates that the deleted region, which represents more than a quarter of the previously defined imprinted domain, is associated with intrauterine growth restriction in maternal heterozygotes. In homozygotes, the deficiency behaves as a Th null allele and can be rescued pharmacologically by bypassing the metabolic requirement for TH in utero. Our results show that the deleted interval is not required for normal imprinting on distal Chr 7 and uncover a new imprinted growth phenotype.

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Year:  2009        PMID: 19684026      PMCID: PMC3817080          DOI: 10.1093/hmg/ddp379

Source DB:  PubMed          Journal:  Hum Mol Genet        ISSN: 0964-6906            Impact factor:   6.150


  59 in total

1.  Loss of imprinting of a paternally expressed transcript, with antisense orientation to KVLQT1, occurs frequently in Beckwith-Wiedemann syndrome and is independent of insulin-like growth factor II imprinting.

Authors:  M P Lee; M R DeBaun; K Mitsuya; H L Galonek; S Brandenburg; M Oshimura; A P Feinberg
Journal:  Proc Natl Acad Sci U S A       Date:  1999-04-27       Impact factor: 11.205

2.  BiQ Analyzer: visualization and quality control for DNA methylation data from bisulfite sequencing.

Authors:  Christoph Bock; Sabine Reither; Thomas Mikeska; Martina Paulsen; Jörn Walter; Thomas Lengauer
Journal:  Bioinformatics       Date:  2005-09-01       Impact factor: 6.937

3.  Circular chromosome conformation capture (4C) uncovers extensive networks of epigenetically regulated intra- and interchromosomal interactions.

Authors:  Zhihu Zhao; Gholamreza Tavoosidana; Mikael Sjölinder; Anita Göndör; Piero Mariano; Sha Wang; Chandrasekhar Kanduri; Magda Lezcano; Kuljeet Singh Sandhu; Umashankar Singh; Vinod Pant; Vijay Tiwari; Sreenivasulu Kurukuti; Rolf Ohlsson
Journal:  Nat Genet       Date:  2006-10-08       Impact factor: 38.330

4.  HoxD cluster scanning deletions identify multiple defects leading to paralysis in the mouse mutant Ironside.

Authors:  Basile Tarchini; Thi Hanh Nguyen Huynh; Greg A Cox; Denis Duboule
Journal:  Genes Dev       Date:  2005-12-01       Impact factor: 11.361

5.  Evolution of the Beckwith-Wiedemann syndrome region in vertebrates.

Authors:  Martina Paulsen; Tarang Khare; Christopher Burgard; Sascha Tierling; Jörn Walter
Journal:  Genome Res       Date:  2004-12-08       Impact factor: 9.043

6.  A maternally methylated CpG island in KvLQT1 is associated with an antisense paternal transcript and loss of imprinting in Beckwith-Wiedemann syndrome.

Authors:  N J Smilinich; C D Day; G V Fitzpatrick; G M Caldwell; A C Lossie; P R Cooper; A C Smallwood; J A Joyce; P N Schofield; W Reik; R D Nicholls; R Weksberg; D J Driscoll; E R Maher; T B Shows; M J Higgins
Journal:  Proc Natl Acad Sci U S A       Date:  1999-07-06       Impact factor: 11.205

7.  A 210-kb segment of tandem repeats and retroelements located between imprinted subdomains of mouse distal chromosome 7.

Authors:  Hisao Shirohzu; Takaaki Yokomine; Chiyoko Sato; Reiko Kato; Atsushi Toyoda; Wahyu Purbowasito; Chikako Suda; Tsunehiro Mukai; Masahira Hattori; Katsuzumi Okumura; Yoshiyuki Sakaki; Hiroyuki Sasaki
Journal:  DNA Res       Date:  2004-10-31       Impact factor: 4.458

8.  The two-domain hypothesis in Beckwith-Wiedemann syndrome: autonomous imprinting of the telomeric domain of the distal chromosome 7 cluster.

Authors:  Flavia Cerrato; Angela Sparago; Ines Di Matteo; Xiangang Zou; Wendy Dean; Hiroyuki Sasaki; Paul Smith; Rita Genesio; Marianne Bruggemann; Wolf Reik; Andrea Riccio
Journal:  Hum Mol Genet       Date:  2005-01-07       Impact factor: 6.150

9.  Chromosome-wide identification of novel imprinted genes using microarrays and uniparental disomies.

Authors:  Reiner Schulz; Trevelyan R Menheniott; Kathryn Woodfine; Andrew J Wood; Jonathan D Choi; Rebecca J Oakey
Journal:  Nucleic Acids Res       Date:  2006-07-19       Impact factor: 16.971

10.  Cdkn1c (p57Kip2) is the major regulator of embryonic growth within its imprinted domain on mouse distal chromosome 7.

Authors:  Stuart C Andrews; Michelle D Wood; Simon J Tunster; Sheila C Barton; M Azim Surani; Rosalind M John
Journal:  BMC Dev Biol       Date:  2007-05-21       Impact factor: 1.978

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  7 in total

Review 1.  Applications of the site-specific recombinase Cre to the study of genomic imprinting.

Authors:  Rosemary Oh-McGinnis; Meaghan J Jones; Louis Lefebvre
Journal:  Brief Funct Genomics       Date:  2010-07-02       Impact factor: 4.241

Review 2.  The placental imprintome and imprinted gene function in the trophoblast glycogen cell lineage.

Authors:  Louis Lefebvre
Journal:  Reprod Biomed Online       Date:  2012-04-04       Impact factor: 3.828

3.  Partial loss of Ascl2 function affects all three layers of the mature placenta and causes intrauterine growth restriction.

Authors:  Rosemary Oh-McGinnis; Aaron B Bogutz; Louis Lefebvre
Journal:  Dev Biol       Date:  2011-01-14       Impact factor: 3.582

4.  An extended domain of Kcnq1ot1 silencing revealed by an imprinted fluorescent reporter.

Authors:  Meaghan J Jones; Aaron B Bogutz; Louis Lefebvre
Journal:  Mol Cell Biol       Date:  2011-05-16       Impact factor: 4.272

5.  Transcription factor ASCL2 is required for development of the glycogen trophoblast cell lineage.

Authors:  Aaron B Bogutz; Rosemary Oh-McGinnis; Karen J Jacob; Rita Ho-Lau; Ting Gu; Marina Gertsenstein; Andras Nagy; Louis Lefebvre
Journal:  PLoS Genet       Date:  2018-08-10       Impact factor: 5.917

6.  Increased dosage of the imprinted Ascl2 gene restrains two key endocrine lineages of the mouse Placenta.

Authors:  S J Tunster; G I McNamara; H D J Creeth; R M John
Journal:  Dev Biol       Date:  2016-08-16       Impact factor: 3.582

Review 7.  Genetic and Epigenetic Control of CDKN1C Expression: Importance in Cell Commitment and Differentiation, Tissue Homeostasis and Human Diseases.

Authors:  Emanuela Stampone; Ilaria Caldarelli; Alberto Zullo; Debora Bencivenga; Francesco Paolo Mancini; Fulvio Della Ragione; Adriana Borriello
Journal:  Int J Mol Sci       Date:  2018-04-02       Impact factor: 5.923

  7 in total

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