Literature DB >> 19679753

Age-related accumulation of mutations supports a replication-dependent mechanism of spontaneous mutation at tandem repeat DNA Loci in mice.

Robert J Hardwick1, Michael V Tretyakov, Yuri E Dubrova.   

Abstract

Expanded simple tandem repeat (ESTR) loci belong to the class of highly unstable loci in the mouse genome. The mechanisms underlying the very high spontaneous instability at these loci still remain poorly understood. Using single-molecule polymerase chain reaction, here we have compared the pattern of mutation accumulation in tissues with different proliferation capacities in male mice of age 12, 26, 48, and 96 weeks. In the nonproliferating brain, we did not observe any measurable age-related accumulation of ESTR mutations. In contrast, a highly elevated frequency of ESTR mutation was detected in the sperm samples taken from old mice; similar changes were also observed in the bone marrow tissue. The spectra of ESTR mutations accumulated in all tissues of young and old mice did not significantly differ. Taken together, these data clearly imply that spontaneous ESTR mutations occur almost exclusively in replication-proficient cells. To gain further insights into the mechanisms of ESTR mutation, we developed a stochastic model of age-related mutation accumulation. The observed spectra of ESTR mutants accumulated in the brain and sperm were fairly accurately approximated assuming the values of ESTR mutation rate, ranging from 0.01 to 0.04 per cell division. As these estimates dramatically exceed those for protein-coding genes and microsatellite loci, our data therefore suggest that ESTRs represent one of the most unstable loci in the mammalian genome. The results of our study also imply that ESTR loci can be regarded as a class of expanded microsatellites, with the mechanism of spontaneous mutation most probably attributed to replication slippage.

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Year:  2009        PMID: 19679753     DOI: 10.1093/molbev/msp182

Source DB:  PubMed          Journal:  Mol Biol Evol        ISSN: 0737-4038            Impact factor:   16.240


  7 in total

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Journal:  Nucleic Acids Res       Date:  2012-03-20       Impact factor: 16.971

3.  Instability of the octarepeat region of the human prion protein gene.

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Journal:  PLoS One       Date:  2011-10-19       Impact factor: 3.240

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5.  Mutation and Selection in Bacteria: Modelling and Calibration.

Authors:  C D Bayliss; C Fallaize; R Howitt; M V Tretyakov
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6.  Increased apoptosis and DNA double-strand breaks in the embryonic mouse brain in response to very low-dose X-rays but not 50 Hz magnetic fields.

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Journal:  J R Soc Interface       Date:  2014-11-06       Impact factor: 4.118

7.  Homologous recombination occurs frequently at innate GT microsatellites in normal somatic and germ cells in vivo.

Authors:  Jianbo Zheng; Heng Li; Qi Zhang; Lei Sun; Xiangfang Liu; Chen Luo
Journal:  BMC Genomics       Date:  2018-05-11       Impact factor: 3.969

  7 in total

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