Literature DB >> 19669751

Electron spin resonance in membrane research: protein-lipid interactions from challenging beginnings to state of the art.

Derek Marsh1.   

Abstract

Conventional electron paramagnetic resonance (EPR) spectra of lipids that are spn class="Gene">in-labelled close to the terminal methyl end of the acyl chains are able to resolve the lipids directly contacting the protein from those in the fluid bilayer regions of the membrane. This allows determination of both the stoichiometry of lipid-protein interaction (i.e., number of lipid sites at the protein perimeter) and the selectivity of the protein for different lipid species (i.e., association constants relative to the background lipid). Spin-label EPR data are summarised for 20 or more different transmembrane peptides and proteins, and 7 distinct species of lipids. Lineshape simulations of the two-component conventional spin-label EPR spectra allow estimation of the rate at which protein-associated lipids exchange with those in the bulk fluid regions of the membrane. For lipids that do not display a selectivity for the protein, the intrinsic off-rates for exchange are in the region of 10 MHz: less than 10x slower than the rates of diffusive exchange in fluid lipid membranes. Lipids with an affinity for the protein, relative to the background lipid, have off-rates for leaving the protein that are correspondingly slower. Non-linear EPR, which depends on saturation of the spectrum at high radiation intensities, is optimally sensitive to dynamics on the timescale of spin-lattice relaxation, i.e., the microsecond regime. Both progressive saturation and saturation transfer EPR experiments provide definitive evidence that lipids at the protein interface are exchanging on this timescale. The sensitivity of non-linear EPR to low frequencies of spin exchange also allows the location of spin-labelled membrane protein residues relative to those of spin-labelled lipids, in double-labelling experiments.

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Year:  2009        PMID: 19669751      PMCID: PMC2841276          DOI: 10.1007/s00249-009-0512-3

Source DB:  PubMed          Journal:  Eur Biophys J        ISSN: 0175-7571            Impact factor:   1.733


  97 in total

Review 1.  High-field electron spin resonance of spin labels in membranes.

Authors:  Derek Marsh; Dieter Kurad; Vsevolod A Livshits
Journal:  Chem Phys Lipids       Date:  2002-06       Impact factor: 3.329

Review 2.  Magnetic resonance of membranes.

Authors:  P F Knowles; D Marsh
Journal:  Biochem J       Date:  1991-03-15       Impact factor: 3.857

3.  Competition between cholesterol and phosphatidylcholine for the hydrophobic surface of sarcoplasmic reticulum Ca2+-ATPase.

Authors:  J R Silvius; D A McMillen; N D Saley; P C Jost; O H Griffith
Journal:  Biochemistry       Date:  1984-01-31       Impact factor: 3.162

4.  Molecular exchange at the lipid-rhodopsin interface: spin-label electron spin resonance studies of rhodopsin-dimyristoylphosphatidylcholine recombinants.

Authors:  N J Ryba; L I Horváth; A Watts; D Marsh
Journal:  Biochemistry       Date:  1987-06-02       Impact factor: 3.162

5.  Effect of cholesterol on the interaction of seminal plasma protein, PDC-109 with phosphatidylcholine membranes.

Authors:  Musti J Swamy; D Marsh; V Anbazhagan; M Ramakrishnan
Journal:  FEBS Lett       Date:  2002-09-25       Impact factor: 4.124

6.  Integration of a K+ channel-associated peptide in a lipid bilayer: conformation, lipid-protein interactions, and rotational diffusion.

Authors:  L I Horváth; T Heimburg; P Kovachev; J B Findlay; K Hideg; D Marsh
Journal:  Biochemistry       Date:  1995-03-28       Impact factor: 3.162

Review 7.  Structure, dynamics and composition of the lipid-protein interface. Perspectives from spin-labelling.

Authors:  D Marsh; L I Horváth
Journal:  Biochim Biophys Acta       Date:  1998-11-10

8.  Distance measurements using paramagnetic ion-induced relaxation in the saturation transfer electron spin resonance of spin-labeled biomolecules: Application to phospholipid bilayers and interdigitated gel phases.

Authors:  T Páli; R Bartucci; L I Horváth; D Marsh
Journal:  Biophys J       Date:  1992-06       Impact factor: 4.033

9.  Mode of insertion of the signal sequence of a bacterial precursor protein into phospholipid bilayers as revealed by cysteine-based site-directed spectroscopy.

Authors:  R C Keller; D ten Berge; N Nouwen; M M Snel; J Tommassen; D Marsh; B de Kruijff
Journal:  Biochemistry       Date:  1996-03-05       Impact factor: 3.162

10.  Spin-label studies on the origin of the specificity of lipid-protein interactions in Na+,K+-ATPase membranes from Squalus acanthias.

Authors:  M Esmann; D Marsh
Journal:  Biochemistry       Date:  1985-07-02       Impact factor: 3.162

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  20 in total

1.  Depolarization Laplace transform analysis of exchangeable hyperpolarized ¹²⁹Xe for detecting ordering phases and cholesterol content of biomembrane models.

Authors:  Matthias Schnurr; Christopher Witte; Leif Schröder
Journal:  Biophys J       Date:  2014-03-18       Impact factor: 4.033

2.  Interaction of the Mechanosensitive Channel, MscS, with the Membrane Bilayer through Lipid Intercalation into Grooves and Pockets.

Authors:  Tim Rasmussen; Akiko Rasmussen; Limin Yang; Corinna Kaul; Susan Black; Heloisa Galbiati; Stuart J Conway; Samantha Miller; Paul Blount; Ian Rylance Booth
Journal:  J Mol Biol       Date:  2019-06-04       Impact factor: 5.469

3.  Prediction of lipid-binding regions in cytoplasmic and extracellular loops of membrane proteins as exemplified by protein translocation membrane proteins.

Authors:  Rob C A Keller
Journal:  J Membr Biol       Date:  2012-09-09       Impact factor: 1.843

Review 4.  Nanodiscs as a new tool to examine lipid-protein interactions.

Authors:  Mary A Schuler; Ilia G Denisov; Stephen G Sligar
Journal:  Methods Mol Biol       Date:  2013

5.  Peptide-Membrane Interactions by Spin-Labeling EPR.

Authors:  Tatyana I Smirnova; Alex I Smirnov
Journal:  Methods Enzymol       Date:  2015-09-26       Impact factor: 1.600

Review 6.  Ion channels as lipid sensors: from structures to mechanisms.

Authors:  Mackenzie J Thompson; John E Baenziger
Journal:  Nat Chem Biol       Date:  2020-11-16       Impact factor: 15.040

Review 7.  Challenges and approaches to understand cholesterol-binding impact on membrane protein function: an NMR view.

Authors:  Garima Jaipuria; Tina Ukmar-Godec; Markus Zweckstetter
Journal:  Cell Mol Life Sci       Date:  2018-03-08       Impact factor: 9.261

8.  How lipid headgroups sense the membrane environment: an application of ¹⁴N NMR.

Authors:  Jacques P F Doux; Benjamin A Hall; J Antoinette Killian
Journal:  Biophys J       Date:  2012-09-19       Impact factor: 4.033

Review 9.  Latest developments in experimental and computational approaches to characterize protein-lipid interactions.

Authors:  Hyunju Cho; Ming Wu; Betul Bilgin; S Patrick Walton; Christina Chan
Journal:  Proteomics       Date:  2012-11       Impact factor: 3.984

10.  Lipid-protein interactions in plasma membranes of fiber cells isolated from the human eye lens.

Authors:  Marija Raguz; Laxman Mainali; William J O'Brien; Witold K Subczynski
Journal:  Exp Eye Res       Date:  2014-01-31       Impact factor: 3.467

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