Literature DB >> 19669497

A new stochastic individual-based model for pattern formation and its application to predator-prey systems.

Atsushi Yokoyama1, Yoshika Noguchi, Seido Nagano.   

Abstract

Reaction-diffusion theory has played a very important role in the study of pattern formation in biology. However, a group of individuals is described by a single state variable representing population density in reaction-diffusion models, and interaction between individuals can be included only phenomenologically. In this paper, we propose a new scheme that seamlessly combines individual-based models with elements of reaction-diffusion theory and apply it to predator-prey systems as a test of our scheme. In the model, starvation periods and the time to reproductive maturity are modeled for individual predators. Similarly, the life cycle and time to reproductive maturity of an individual prey are modeled. Furthermore, both predators and prey migrate through a two-dimensional space. To include animal migration in the model, we use a relationship between the diffusion and the random numbers generated according to a two-dimensional bivariate normal distribution. Despite the simplicity of this model, our scheme successfully produces logistic patterns and oscillations in the population size of both predator and prey. The peak for the predator population oscillation lags slightly behind the prey peak. The simplicity of this scheme will aid additional study of spatially distributed negative-feedback systems.

Year:  2008        PMID: 19669497      PMCID: PMC2577753          DOI: 10.1007/s10867-008-9055-6

Source DB:  PubMed          Journal:  J Biol Phys        ISSN: 0092-0606            Impact factor:   1.365


  8 in total

1.  Pursuit-evasion predator-prey waves in two spatial dimensions.

Authors:  V N Biktashev; J Brindley; A V Holden; M A Tsyganov
Journal:  Chaos       Date:  2004-12       Impact factor: 3.642

2.  Long-range interactions and evolutionary stability in a predator-prey system.

Authors:  Erik M Rauch; Yaneer Bar-Yam
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2006-02-27

3.  Spontaneous emergence of spatial patterns in a predator-prey model.

Authors:  M V Carneiro; I C Charret
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2007-12-04

4.  Predator-prey dynamics and movement in fractal environments.

Authors:  Kim Cuddington; Peter Yodzis
Journal:  Am Nat       Date:  2002-07       Impact factor: 3.926

5.  Stochastic lattice gas model for a predator-prey system.

Authors: 
Journal:  Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics       Date:  1994-06

6.  Self-reinforcing spatial patterns enslave evolution in a host-parasitoid system.

Authors:  N J Savill; P Rohani; P Hogeweg
Journal:  J Theor Biol       Date:  1997-09-07       Impact factor: 2.691

7.  Simple mathematical models with very complicated dynamics.

Authors:  R M May
Journal:  Nature       Date:  1976-06-10       Impact factor: 49.962

Review 8.  Modeling the model organism Dictyostelium discoideum.

Authors:  S Nagano
Journal:  Dev Growth Differ       Date:  2000-12       Impact factor: 2.053

  8 in total

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