Literature DB >> 19667394

Haladaptatus cibarius sp. nov., an extremely halophilic archaeon from seafood, and emended description of the genus Haladaptatus.

Seong Woon Roh1, Myung-Lip Lee1, Jin-Woo Bae1.   

Abstract

A novel, extremely halophilic archaeon, D43(T), was isolated from traditional salt-fermented seafood in Korea. The cells were Gram-negative-staining and motile. The strain grew at 15-50 degrees C, 10-30 % (w/v) NaCl and pH 6.0-8.0. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain D43(T) is affiliated with the family Halobacteriaceae in the domain Archaea and had 95.5 % 16S rRNA gene sequence similarity with Haladaptatus paucihalophilus DX253(T). The sequence from strain D43(T) formed a clade with those from Hap. paucihalophilus regardless of which tree-generating algorithm was used. DNA-DNA hybridization experiments showed 25.8 % relatedness between the isolate and Hap. paucihalophilus KCTC 4006(T). Major lipids were phosphatidylglycerol, phosphatidylglycerol phosphate methyl ester and two unidentified glycolipids. The DNA G+C content of the isolate was 56.5 mol%. On the basis of this polyphasic taxonomic study, strain D43(T) represents a novel species in the genus Haladaptatus, for which the name Haladaptatus cibarius sp. nov. is proposed. The type strain is D43(T) (=DSM 19505(T) =JCM 15962(T)).

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Year:  2009        PMID: 19667394     DOI: 10.1099/ijs.0.013037-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  5 in total

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Authors:  Heng-Lin Cui; Xin Yang; Yun-Zhuang Mou
Journal:  Extremophiles       Date:  2011-09-08       Impact factor: 2.395

2.  Complete genome sequence of Halalkalicoccus jeotgali B3(T), an extremely halophilic archaeon.

Authors:  Seong Woon Roh; Young-Do Nam; Seong-Hyeuk Nam; Sang-Haeng Choi; Hong-Seog Park; Jin-Woo Bae
Journal:  J Bacteriol       Date:  2010-07-02       Impact factor: 3.490

3.  Draft genome sequence of the extremely halophilic archaeon Haladaptatus cibarius type strain D43(T) isolated from fermented seafood.

Authors:  Hae-Won Lee; Dae-Won Kim; Mi-Hwa Lee; Byung-Yong Kim; Yong-Joon Cho; Kyung June Yim; Hye Seon Song; Jin-Kyu Rhee; Myung-Ji Seo; Hak-Jong Choi; Jong-Soon Choi; Dong-Gi Lee; Changmann Yoon; Young-Do Nam; Seong Woon Roh
Journal:  Stand Genomic Sci       Date:  2015-08-13

4.  Occurrence of viable, red-pigmented haloarchaea in the plumage of captive flamingoes.

Authors:  Kyung June Yim; Joseph Kwon; In-Tae Cha; Kyung-Seo Oh; Hye Seon Song; Hae-Won Lee; Jin-Kyu Rhee; Eun-Ji Song; Jeong Rae Rho; Mi Lyu Seo; Jong-Soon Choi; Hak-Jong Choi; Sung-Jae Lee; Young-Do Nam; Seong Woon Roh
Journal:  Sci Rep       Date:  2015-11-10       Impact factor: 4.379

5.  Microbial successions and metabolite changes during fermentation of salted shrimp (saeu-jeot) with different salt concentrations.

Authors:  Se Hee Lee; Ji Young Jung; Che Ok Jeon
Journal:  PLoS One       Date:  2014-02-28       Impact factor: 3.240

  5 in total

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