Literature DB >> 19659321

Quantifying water density fluctuations and compressibility of hydration shells of hydrophobic solutes and proteins.

Sapna Sarupria1, Shekhar Garde.   

Abstract

We probe the effects of solute length scale, attractions, and hydrostatic pressure on hydrophobic hydration shells using extensive molecular simulations. The hydration shell compressibility and water fluctuations both display a nonmonotonic dependence on solute size, with a minimum near molecular solutes and enhanced fluctuations for larger ones. These results and calculations on proteins suggest that the hydration shells of unfolded proteins are more compressible than of folded ones contributing to pressure denaturation. More importantly, the nonmonotonicity implies a solute curvature-dependent pressure sensitivity for interactions between hydrophobic solutes.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19659321     DOI: 10.1103/PhysRevLett.103.037803

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  27 in total

1.  The behavior of the hydrophobic effect under pressure and protein denaturation.

Authors:  J Raúl Grigera; Andres N McCarthy
Journal:  Biophys J       Date:  2010-04-21       Impact factor: 4.033

2.  Hydration potential of lysozyme: protein dehydration using a single microparticle technique.

Authors:  Deborah L Rickard; P Brent Duncan; David Needham
Journal:  Biophys J       Date:  2010-03-17       Impact factor: 4.033

3.  On the roles of substrate binding and hinge unfolding in conformational changes of adenylate kinase.

Authors:  Jason B Brokaw; Jhih-Wei Chu
Journal:  Biophys J       Date:  2010-11-17       Impact factor: 4.033

4.  Role of electrostatics in modulating hydrophobic interactions and barriers to hydrophobic assembly.

Authors:  Brad A Bauer; Sandeep Patel
Journal:  J Phys Chem B       Date:  2010-06-24       Impact factor: 2.991

5.  Characterizing hydrophobicity of interfaces by using cavity formation, solute binding, and water correlations.

Authors:  Rahul Godawat; Sumanth N Jamadagni; Shekhar Garde
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-25       Impact factor: 11.205

6.  An improved coarse-grained model of solvation and the hydrophobic effect.

Authors:  Patrick Varilly; Amish J Patel; David Chandler
Journal:  J Chem Phys       Date:  2011-02-21       Impact factor: 3.488

7.  Affinity of small-molecule solutes to hydrophobic, hydrophilic, and chemically patterned interfaces in aqueous solution.

Authors:  Jacob I Monroe; Sally Jiao; R Justin Davis; Dennis Robinson Brown; Lynn E Katz; M Scott Shell
Journal:  Proc Natl Acad Sci U S A       Date:  2021-01-05       Impact factor: 11.205

Review 8.  Lessons from pressure denaturation of proteins.

Authors:  Julien Roche; Catherine A Royer
Journal:  J R Soc Interface       Date:  2018-10-03       Impact factor: 4.118

9.  Activated drying in hydrophobic nanopores and the line tension of water.

Authors:  Ludivine Guillemot; Thierry Biben; Anne Galarneau; Gérard Vigier; Élisabeth Charlaix
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-09       Impact factor: 11.205

10.  Fluctuations of water near extended hydrophobic and hydrophilic surfaces.

Authors:  Amish J Patel; Patrick Varilly; David Chandler
Journal:  J Phys Chem B       Date:  2010-02-04       Impact factor: 2.991

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.