Literature DB >> 19656926

Salinicoccus carnicancri sp. nov., a halophilic bacterium isolated from a Korean fermented seafood.

Mi-Ja Jung1, Min-Soo Kim2,1, Seong Woon Roh2,1, Kee-Sun Shin2, Jin-Woo Bae2,1.   

Abstract

A novel, moderately halophilic bacterium belonging to the genus Salinicoccus was isolated from crabs preserved in soy sauce: a traditional Korean fermented seafood. Colonies of strain Crm(T) were ivory and the cells were non-motile, Gram-positive cocci. The organism was non-sporulating, catalase-positive and oxidase-negative. The major fatty acids of strain Crm(T) were iso-C(15 : 0) (22.0 %), anteiso-C(15 : 0) (40.6 %) and anteiso-C(17 : 0) (12.1 %). The cell wall peptidoglycan contained lysine and glycine, and the major isoprenoid quinone was MK-6. The polar lipids were phosphatidylglycerol, diphosphatidylglycerol and an unidentified glycolipid. The genomic DNA G+C content was 47.8 mol%. Strain Crm(T) was closely related to the type strain of Salinicoccus halodurans, with which it shared 96.9 % 16S rRNA gene sequence similarity. The DNA-DNA hybridization value between strains Crm(T) and S. halodurans DSM 19336(T) was 7.6 %. Based on phenotypic, genetic and phylogenetic data, strain Crm(T) should be classified as a novel species within the genus Salinicoccus , for which the name Salinicoccus carnicancri sp. nov. is proposed. The type strain is Crm(T) (=KCTC 13301(T) =JCM 15796(T)).

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Year:  2009        PMID: 19656926     DOI: 10.1099/ijs.0.012047-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  3 in total

1.  Genome sequence of the moderately halophilic bacterium Salinicoccus carnicancri type strain Crm(T) (= DSM 23852(T)).

Authors:  Dong-Wook Hyun; Tae Woong Whon; Yong-Joon Cho; Jongsik Chun; Min-Soo Kim; Mi-Ja Jung; Na-Ri Shin; Joon-Yong Kim; Pil Soo Kim; Ji-Hyun Yun; Jina Lee; Sei Joon Oh; Jin-Woo Bae
Journal:  Stand Genomic Sci       Date:  2013-06-03

2.  Whole genome sequencing and annotation of halophilic Salinicoccus sp. BAB 3246 isolated from the coastal region of Gujarat.

Authors:  Vishal Mevada; Shradhdha Patel; Jignesh Pandya; Himani Joshi; Rajesh Patel
Journal:  Genom Data       Date:  2017-06-21

3.  High throughput genomic sequencing of bioaerosols in broiler chicken production facilities.

Authors:  Kate M O'Brien; Michael S Chimenti; Morgan Farnell; Tom Tabler; Thomas Bair; Joey L Bray; Matthew W Nonnenmann
Journal:  Microb Biotechnol       Date:  2016-07-28       Impact factor: 5.813

  3 in total

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